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Q9KVZ7

- T2X1_XANVA

UniProt

Q9KVZ7 - T2X1_XANVA

Protein

Type-2 restriction enzyme XhoI

Gene
N/A
Organism
Xanthomonas vasicola
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 36 (01 Oct 2014)
      Sequence version 1 (01 Oct 2000)
      Previous versions | rss
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    Functioni

    Recognizes the double-stranded sequence CTCGAG and cleaves after C-1.

    Catalytic activityi

    Endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates.

    GO - Molecular functioni

    1. DNA binding Source: InterPro
    2. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA restriction-modification system Source: UniProtKB-KW

    Keywords - Molecular functioni

    Endonuclease, Hydrolase, Nuclease

    Keywords - Biological processi

    Restriction system

    Protein family/group databases

    REBASEi2136. XhoI.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Type-2 restriction enzyme XhoI (EC:3.1.21.4)
    Short name:
    R.XhoI
    Alternative name(s):
    Endonuclease XhoI
    Type II restriction enzyme XhoI
    OrganismiXanthomonas vasicola
    Taxonomic identifieri56459 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 248248Type-2 restriction enzyme XhoIPRO_0000077372Add
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Family and domain databases

    InterProiIPR007636. Restrct_endonuc_II_XhoI.
    [Graphical view]
    PfamiPF04555. XhoI. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000994. Restrict_endonuc_II_XhoI. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q9KVZ7-1 [UniParc]FASTAAdd to Basket

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    MALDLAEYDR LARLGVAQFW DGRSSALEND EERSQGGERS GVLGGRNMDG    50
    FLAMIEGIVR KNGLPDAEVC IKGRPNLTLP GYYRPTKLWD VLVFDGKKLV 100
    AAVELKSHVG PSFGNNFNNR AEEAIGTAHD LATAIREGIL GDQLPPFTGW 150
    LILVEDCEKS KRAVRDSSPH FPVFPDFKGA SYLTRYEVLC RKLILKGFTP 200
    RPQSLLRPAL RVLGATIASF RKPRVCAHLR HGWPAMYPVG QSRIRVNF 248
    Length:248
    Mass (Da):27,575
    Last modified:October 1, 2000 - v1
    Checksum:i81D3B2B231BE6622
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB046567 Genomic DNA. Translation: BAB03597.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB046567 Genomic DNA. Translation: BAB03597.1 .

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Chemistry

    ChEMBLi CHEMBL2439945.

    Protein family/group databases

    REBASEi 2136. XhoI.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    InterProi IPR007636. Restrct_endonuc_II_XhoI.
    [Graphical view ]
    Pfami PF04555. XhoI. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000994. Restrict_endonuc_II_XhoI. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Nucleotide sequences of the XhoI methylase and endonuclease genes."
      Morita M., Sugino Y.
      Submitted (JUL-2000) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: ATCC 13461 / XH 3 / LMG 7416.

    Entry informationi

    Entry nameiT2X1_XANVA
    AccessioniPrimary (citable) accession number: Q9KVZ7
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 11, 2004
    Last sequence update: October 1, 2000
    Last modified: October 1, 2014
    This is version 36 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Documents

    1. Restriction enzymes and methylases
      Classification of restriction enzymes and methylases and list of entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3