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Q9KVZ7

- T2X1_XANVA

UniProt

Q9KVZ7 - T2X1_XANVA

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Protein

Type-2 restriction enzyme XhoI

Gene
N/A
Organism
Xanthomonas vasicola
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Recognizes the double-stranded sequence CTCGAG and cleaves after C-1.

Catalytic activityi

Endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates.

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA restriction-modification system Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Endonuclease, Hydrolase, Nuclease

Keywords - Biological processi

Restriction system

Protein family/group databases

REBASEi2136. XhoI.

Names & Taxonomyi

Protein namesi
Recommended name:
Type-2 restriction enzyme XhoI (EC:3.1.21.4)
Short name:
R.XhoI
Alternative name(s):
Endonuclease XhoI
Type II restriction enzyme XhoI
OrganismiXanthomonas vasicola
Taxonomic identifieri56459 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 248248Type-2 restriction enzyme XhoIPRO_0000077372Add
BLAST

Family & Domainsi

Sequence similaritiesi

Family and domain databases

InterProiIPR007636. Restrct_endonuc_II_XhoI.
[Graphical view]
PfamiPF04555. XhoI. 1 hit.
[Graphical view]
PIRSFiPIRSF000994. Restrict_endonuc_II_XhoI. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9KVZ7-1 [UniParc]FASTAAdd to Basket

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MALDLAEYDR LARLGVAQFW DGRSSALEND EERSQGGERS GVLGGRNMDG    50
FLAMIEGIVR KNGLPDAEVC IKGRPNLTLP GYYRPTKLWD VLVFDGKKLV 100
AAVELKSHVG PSFGNNFNNR AEEAIGTAHD LATAIREGIL GDQLPPFTGW 150
LILVEDCEKS KRAVRDSSPH FPVFPDFKGA SYLTRYEVLC RKLILKGFTP 200
RPQSLLRPAL RVLGATIASF RKPRVCAHLR HGWPAMYPVG QSRIRVNF 248
Length:248
Mass (Da):27,575
Last modified:October 1, 2000 - v1
Checksum:i81D3B2B231BE6622
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB046567 Genomic DNA. Translation: BAB03597.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB046567 Genomic DNA. Translation: BAB03597.1 .

3D structure databases

ModBasei Search...
MobiDBi Search...

Chemistry

ChEMBLi CHEMBL2439945.

Protein family/group databases

REBASEi 2136. XhoI.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

InterProi IPR007636. Restrct_endonuc_II_XhoI.
[Graphical view ]
Pfami PF04555. XhoI. 1 hit.
[Graphical view ]
PIRSFi PIRSF000994. Restrict_endonuc_II_XhoI. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Nucleotide sequences of the XhoI methylase and endonuclease genes."
    Morita M., Sugino Y.
    Submitted (JUL-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 13461 / XH 3 / LMG 7416.

Entry informationi

Entry nameiT2X1_XANVA
AccessioniPrimary (citable) accession number: Q9KVZ7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 1, 2000
Last modified: June 11, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. Restriction enzymes and methylases
    Classification of restriction enzymes and methylases and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3