Q9KVM5 (Q9KVM5_VIBCH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Oxygen-independent coproporphyrinogen III oxidase EMBL AAF93294.1

Gene names

Ordered Locus Names:

VC_0116

Organism

Vibrio cholerae

Taxonomic identifier

666 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio

Protein attributes

Sequence length	480 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	porphyrin-containing compound biosynthetic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	coproporphyrinogen oxidase activity Inferred from electronic annotation. Source: InterPro iron-sulfur cluster binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9KVM5 [UniParc]. Last modified October 1, 2000. Version 1. Checksum: CCA8882A657948F3	FASTA	480	55,598
	10 20 30 40 50 60 MSCGRIARQE LSKTERFIMS SYVVPSQQIV WDQAILDKYN YSGPRYTSYP TAVEFHEAFT 70 80 90 100 110 120 IADFDMACTQ YPERPLSLYI HIPFCHKLCY YCGCNKVITR HSHKADEYLD VLEHEIRQRA 130 140 150 160 170 180 SLLIGRNVTQ LHFGGGTPTF LTNAQISRLM TLLHSEFHFA DEAEISIEID PREIQLEVLD 190 200 210 220 230 240 HLRQEGFNRV SIGVQDFNKE VQKLVNREQD EQFIFDLVER AKQLGFRSTN LDLIYGLPKQ 250 260 270 280 290 300 TAVTFAQTLQ QVLTMQPGRL SVFNYAHMPQ LFAAQRKIKE ADLPAAEEKL AILQQTITTL 310 320 330 340 350 360 TGAGYQFIGM DHFALPDDEL AIAQRSGILH RNFQGYTTQG ECDLVGFGVS AISMVGDAYA 370 380 390 400 410 420 QNQKELKKYY AQVNEMRHAL WKGVTLDKDD LLRREVIKQL ICNFKLDKTA IEREFNLRFN 430 440 450 460 470 480 HYFRQDLALL QTFIDDGLVT VDERMIEVTL RGRLLIRNIC MCFDKYLRER ARQQQFSRVI

References

[1]

"DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae." Heidelberg J.F., Eisen J.A., Nelson W.C., Clayton R.A., Gwinn M.L., Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Umayam L.A., Gill S.R., Nelson K.E., Read T.D., Tettelin H., Richardson D.L., Ermolaeva M.D., Vamathevan J.J., Bass S. , Qin H., Dragoi I., Sellers P., McDonald L.A., Utterback T.R., Fleischmann R.D., Nierman W.C., White O., Salzberg S.L., Smith H.O., Colwell R.R., Mekalanos J.J., Venter J.C., Fraser C.M. Nature 406:477-483(2000) [PubMed: 10952301] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 39315 / El Tor Inaba N16961 / Serotype O1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE003852 Genomic DNA. Translation: AAF93294.1.
PIR	B82362.
RefSeq	NP_229775.1. NC_002505.1.
3D structure databases
HSSP	HSSP built from PDB template 1OLT based on UniProtKB P32131.
ProteinModelPortal	Q9KVM5.
SMR	Q9KVM5. Positions 27-467.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2614871.
GenomeReviews	Gene locus VC_0116 in contig AE003852_GR.
KEGG	vch:VC0116.
PATRIC	20079276. VBIVibCho83274_0107.
TIGR	VC_0116.
Phylogenomic databases
HOGENOM	HBG285973.
OMA	TPTFFSP.
PhylomeDB	Q9KVM5.
ProtClustDB	PRK09249.
Family and domain databases
InterPro	IPR004558. Coprogen_oxidase_HemN. IPR006638. Elp3/MiaB/NifB. IPR010723. HemN_C. IPR007197. rSAM. IPR023404. rSAM_horseshoe. [Graphical view]
Gene3D	G3DSA:3.80.30.20. G3DSA:3.80.30.20. 1 hit.
KO	K02495.
Pfam	PF06969. HemN_C. 1 hit. PF04055. Radical_SAM. 1 hit. [Graphical view]
SMART	SM00729. Elp3. 1 hit. [Graphical view]
TIGRFAMs	TIGR00538. HemN. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q9KVM5_VIBCH

Accession

Primary (citable) accession number: Q9KVM5

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2000
Last sequence update:	October 1, 2000
Last modified:	December 14, 2011
This is version 53 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)