Q9KUX4 (CYSJ_VIBCH) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 56.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Sulfite reductase [NADPH] flavoprotein alpha-component Short name=SiR-FP EC=1.8.1.2 | ||||
| Gene names |
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| Organism | Vibrio cholerae | ||||
| Taxonomic identifier | 666 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio |
Protein attributes
| Sequence length | 614 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component By similarity. HAMAP MF_01541 |
| Catalytic activity | H2S + 3 NADP+ + 3 H2O = sulfite + 3 NADPH. HAMAP MF_01541 |
| Cofactor | Binds 1 FAD per subunit By similarity. HAMAP MF_01541 Binds 1 FMN per subunit By similarity. HAMAP MF_01541 |
| Pathway | Sulfur metabolism; hydrogen sulfide biosynthesis; hydrogen sulfide from sulfite (NADPH route): step 1/1. HAMAP MF_01541 |
| Subunit structure | Alpha(8)-beta8. The alpha component is a flavoprotein, the beta component is a hemoprotein By similarity. |
| Sequence similarities | Contains 1 FAD-binding FR-type domain. Contains 1 flavodoxin-like domain. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Amino-acid biosynthesis Cysteine biosynthesis Electron transport Transport |
| Ligand | FAD FMN Flavoprotein NADP |
| Molecular function | Oxidoreductase |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | cysteine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW electron transport chainInferred from electronic annotation. Source: UniProtKB-KW sulfate assimilationInferred from electronic annotation. Source: InterPro transportInferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | FMN binding Inferred from electronic annotation. Source: InterPro flavin adenine dinucleotide bindingInferred from electronic annotation. Source: InterPro iron ion bindingInferred from electronic annotation. Source: InterPro sulfite reductase (NADPH) activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 614 | 614 | Sulfite reductase [NADPH] flavoprotein alpha-component HAMAP MF_01541 | PRO_0000199939 | |||||
Regions | |||||||||
| Domain | 79 – 217 | 139 | Flavodoxin-like | ||||||
| Domain | 249 – 463 | 215 | FAD-binding FR-type | ||||||
| Nucleotide binding | 85 – 89 | 5 | FMN By similarity | ||||||
| Nucleotide binding | 132 – 137 | 6 | FMN By similarity | ||||||
| Nucleotide binding | 165 – 196 | 32 | FMN By similarity | ||||||
| Nucleotide binding | 401 – 404 | 4 | FAD By similarity | ||||||
| Nucleotide binding | 435 – 437 | 3 | FAD By similarity | ||||||
| Nucleotide binding | 534 – 542 | 9 | NADP By similarity | ||||||
Sites | |||||||||
| Binding site | 504 | 1 | NADP By similarity | ||||||
Sequences
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References
| [1] | "DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae." Heidelberg J.F., Eisen J.A., Nelson W.C., Clayton R.A., Gwinn M.L., Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Umayam L.A., Gill S.R., Nelson K.E., Read T.D., Tettelin H., Richardson D.L., Ermolaeva M.D., Vamathevan J.J., Bass S. Fraser C.M.Nature 406:477-483(2000) [PubMed: 10952301] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 39315 / El Tor Inaba N16961 / Serotype O1. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AE003852 Genomic DNA. Translation: AAF93557.1. |
| PIR | B82329. |
| RefSeq | NP_230038.1. NC_002505.1. |
3D structure databases | |
| ProteinModelPortal | Q9KUX4. |
| SMR | Q9KUX4. Positions 245-614. |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 2615027. |
| GenomeReviews | Gene locus VC_0384 in contig AE003852_GR. |
| KEGG | vch:VC0384. |
| PATRIC | 20079839. VBIVibCho83274_0360. |
| TIGR | VC_0384. |
Phylogenomic databases | |
| HOGENOM | HBG736048. |
| OMA | ESADEYL. |
| PhylomeDB | Q9KUX4. |
| ProtClustDB | CLSK873955. |
Family and domain databases | |
| HAMAP | MF_01541. CysJ. [Tree] |
| InterPro | IPR010199. CysJ. IPR003097. FAD-binding_1. IPR017927. Fd_Rdtase_FAD-bd. IPR001094. Flavdoxin. IPR008254. Flavodoxin/NO_synth. IPR001709. Flavoprot_Pyr_Nucl_cyt_Rdtase. IPR023173. NADPH_Cyt_P450_Rdtase_dom3. IPR001433. OxRdtase_FAD/NAD-bd. IPR017938. Riboflavin_synthase-like_b-brl. [Graphical view] |
| Gene3D | G3DSA:1.20.990.10. NADPH_Cyt_P450_Rdtase_dom3. 1 hit. |
| KO | K00380. |
| Pfam | PF00667. FAD_binding_1. 1 hit. PF00258. Flavodoxin_1. 1 hit. PF00175. NAD_binding_1. 1 hit. [Graphical view] |
| PIRSF | PIRSF000207. SiR-FP_CysJ. 1 hit. |
| PRINTS | PR00369. FLAVODOXIN. PR00371. FPNCR. |
| SUPFAM | SSF63380. Riboflavin_synthase_like_b-brl. 1 hit. |
| TIGRFAMs | TIGR01931. CysJ. 1 hit. |
| PROSITE | PS51384. FAD_FR. 1 hit. PS50902. FLAVODOXIN_LIKE. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | CYSJ_VIBCH | ||||||||
| Accession | Primary (citable) accession number: Q9KUX4 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

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