Q9KUS3 (APAG_VIBCH) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 56.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Protein ApaG | ||||
| Gene names |
| ||||
| Organism | Vibrio cholerae | ||||
| Taxonomic identifier | 666 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio |
Protein attributes
| Sequence length | 126 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Sequence similarities | Contains 1 apaG domain. |
Ontologies
| Keywords | |
|---|---|
| Technical term | 3D-structure Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| None. [Check GOA] | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||||||||||||||||||
Molecule processing | |||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 126 | 126 | Protein ApaG HAMAP MF_00791 | PRO_0000197965 | |||||||||||||||||||||||
Regions | |||||||||||||||||||||||||||
| Domain | 2 – 126 | 125 | ApaG | ||||||||||||||||||||||||
Secondary structure | |||||||||||||||||||||||||||
Helix Strand Turn | |||||||||||||||||||||||||||
| Beta strand | 8 – 16 | 9 | |||||||||||||||||||||||||
| Helix | 18 – 20 | 3 | |||||||||||||||||||||||||
| Helix | 23 – 25 | 3 | |||||||||||||||||||||||||
| Beta strand | 27 – 38 | 12 | |||||||||||||||||||||||||
| Beta strand | 40 – 42 | 3 | |||||||||||||||||||||||||
| Beta strand | 44 – 55 | 12 | |||||||||||||||||||||||||
| Beta strand | 60 – 68 | 9 | |||||||||||||||||||||||||
| Beta strand | 80 – 103 | 24 | |||||||||||||||||||||||||
| Beta strand | 109 – 120 | 12 | |||||||||||||||||||||||||
Sequences
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References
| [1] | "DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae." Heidelberg J.F., Eisen J.A., Nelson W.C., Clayton R.A., Gwinn M.L., Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Umayam L.A., Gill S.R., Nelson K.E., Read T.D., Tettelin H., Richardson D.L., Ermolaeva M.D., Vamathevan J.J., Bass S. Fraser C.M.Nature 406:477-483(2000) [PubMed: 10952301] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 39315 / El Tor Inaba N16961 / Serotype O1. |
Cross-references
Sequence databases | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AE003852 Genomic DNA. Translation: AAF93615.1. | ||||||||||||
| PIR | A82323. | ||||||||||||
| RefSeq | NP_230096.1. NC_002505.1. | ||||||||||||
3D structure databases | |||||||||||||
| PDBe RCSB PDB PDBj |
| ||||||||||||
| ProteinModelPortal | Q9KUS3. | ||||||||||||
| SMR | Q9KUS3. Positions 1-124. | ||||||||||||
| ModBase | Search... | ||||||||||||
Protocols and materials databases | |||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||
Genome annotation databases | |||||||||||||
| GeneID | 2615774. | ||||||||||||
| GenomeReviews | Gene locus VC_0442 in contig AE003852_GR. | ||||||||||||
| KEGG | vch:VC0442. | ||||||||||||
| PATRIC | 20079963. VBIVibCho83274_0416. | ||||||||||||
| TIGR | VC_0442. | ||||||||||||
Phylogenomic databases | |||||||||||||
| HOGENOM | HBG746214. | ||||||||||||
| OMA | SRHWVIT. | ||||||||||||
| PhylomeDB | Q9KUS3. | ||||||||||||
| ProtClustDB | PRK05461. | ||||||||||||
Family and domain databases | |||||||||||||
| HAMAP | MF_00791. ApaG. [Tree] | ||||||||||||
| InterPro | IPR007474. ApaG_domain. IPR023065. Uncharacterised_ApaG. [Graphical view] | ||||||||||||
| Gene3D | G3DSA:2.60.40.1470. ApaG. 1 hit. | ||||||||||||
| KO | K06195. | ||||||||||||
| Pfam | PF04379. DUF525. 1 hit. [Graphical view] | ||||||||||||
| SUPFAM | SSF110069. ApaG. 1 hit. | ||||||||||||
| PROSITE | PS51087. APAG. 1 hit. [Graphical view] | ||||||||||||
| ProtoNet | Search... | ||||||||||||
Entry information
| Entry name | APAG_VIBCH | ||||||||
| Accession | Primary (citable) accession number: Q9KUS3 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with