Reviewed,
UniProtKB/Swiss-Prot Q9KUQ4 (Y461_VIBCH)
Last modified
December 15, 2009.
Version 47.
History...
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: UPF0001 protein VC_0461 | ||
| Gene names |
| ||
| Organism | Vibrio cholerae [Complete proteome] [HAMAP] | ||
| Taxonomic identifier | 666 [NCBI] | ||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio |
Protein attributes
| Sequence length | 236 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Cofactor | Pyridoxal phosphate By similarity. |
| Sequence similarities | Belongs to the UPF0001 family. |
Ontologies
| Keywords | |
|---|---|
| Ligand | Pyridoxal phosphate |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| None. [Check GOA] | |
Sequence annotation (Features)
Sequences
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References
| [1] | "DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae." Heidelberg J.F., Eisen J.A., Nelson W.C., Clayton R.A., Gwinn M.L., Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Umayam L.A., Gill S.R., Nelson K.E., Read T.D., Tettelin H., Richardson D.L., Ermolaeva M.D., Vamathevan J.J., Bass S. Fraser C.M.Nature 406:477-483(2000) [PubMed: 10952301] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 39315 / El Tor Inaba N16961 / Serotype O1. |
Cross-references
Sequence databases | |
|---|---|
| AE003852 Genomic DNA. Translation: AAF93634.1. | |
| PIR | E82321. |
| RefSeq | NP_230115.1. |
3D structure databases | |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 2615123. |
| GenomeReviews | Gene locus VC_0461 in contig AE003852_GR. |
| KEGG | vch:VC0461. |
| TIGR | VC_0461. |
Phylogenomic databases | |
| HOGENOM | HBG289671. |
| OMA | HGSTMVR. |
Family and domain databases | |
| InterPro | IPR001608. Ala_racemase_N. IPR011078. Prd-pyrdxlP-dep_enz_YBL036C. [Graphical view] |
| PANTHER | PTHR10146. PP_YBL036C. 1 hit. |
| Pfam | PF01168. Ala_racemase_N. 1 hit. [Graphical view] |
| PIRSF | PIRSF004848. YBL036c_PLPDEIII. 1 hit. |
| PROSITE | PS01211. UPF0001. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Y461_VIBCH | ||||||||
| Accession | Primary (citable) accession number: Q9KUQ4 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| SIMILARITY comments Index of protein domains and families |
| Uncharacterized protein families (UPF) List of uncharacterized protein family (UPF) entries |

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