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Q9KUD9 (RSMI_VIBCH) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribosomal RNA small subunit methyltransferase I
EC=2.1.1.198
Alternative name(s):
16S rRNA 2'-O-ribose C1402 methyltransferase
rRNA (cytidine-2'-O-)-methyltransferase RsmI
Gene names
Name:rsmI
Ordered Locus Names:VC_0582
OrganismVibrio cholerae
Taxonomic identifier666 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio

Protein attributes

Sequence length288 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA By similarity. HAMAP MF_01877

Catalytic activity

S-adenosyl-L-methionine + cytosine(1402) in 16S rRNA = S-adenosyl-L-homocysteine + 2'-O-methylcytosine(1402) in 16S rRNA. HAMAP MF_01877

Subcellular location

Cytoplasm Potential HAMAP MF_01877.

Sequence similarities

Belongs to the methyltransferase superfamily. RsmI family.

Ontologies

Keywords
   Biological processrRNA processing
   Cellular componentCytoplasm
   LigandS-adenosyl-L-methionine
   Molecular functionMethyltransferase
Transferase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processrRNA processing

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionmethyltransferase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 288288Ribosomal RNA small subunit methyltransferase I HAMAP MF_01877
PRO_0000211961

Sequences

Sequence LengthMass (Da)Tools
Q9KUD9 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: F64C455A0A80F501

FASTA28831,464
        10         20         30         40         50         60 
MTDNKTVPNG APILYIVPTP IGNLGDITQR ALDVLASVDM IAVEDTRHTG KLLAHFNIST 

        70         80         90        100        110        120 
KTFALHDHNE QQKAQVLVDK LLSGLSIALV SDAGTPLISD PGYHLVTQCR QAGVKVVPLP 

       130        140        150        160        170        180 
GPCAVITALS ASGLPSDSFS FEGFLPAKSK ARKDKLLEIA KVSRTCIFYE SPHRICESLQ 

       190        200        210        220        230        240 
DMLDVLGGER EVVLARELTK TFETIQGMPL AELITWIAED DNRKKGEMVL LVHGYRDAGE 

       250        260        270        280 
QQLPDEALRT LTILTKELPL KKAAALVAEI HQLKKNALYK WGLENLGE

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE003852 Genomic DNA. Translation: AAF93750.1.
PIRC82306.
RefSeqNP_230233.1. NC_002505.1.

3D structure databases

ProteinModelPortalQ9KUD9.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID2615370.
GenomeReviewsGene locus VC_0582 in contig AE003852_GR.
KEGGvch:VC0582.
PATRIC20080278. VBIVibCho83274_0555.
TIGRVC_0582.

Phylogenomic databases

HOGENOMHBG529058.
OMAIASDRFC.
PhylomeDBQ9KUD9.
ProtClustDBCLSK874019.

Family and domain databases

HAMAPMF_01877. 16SrRNA_methyltr_I.
[Tree]
InterProIPR000878. 4pyrrol_Mease.
IPR014777. 4pyrrole_Mease_sub1.
IPR008189. rRNA_ssu_MeTfrase_I.
IPR018063. SAM_MeTrfase_RsmI_CS.
[Graphical view]
Gene3DG3DSA:3.40.1010.10. 4pyrrole_Mease_sub1. 1 hit.
KOK07056.
PANTHERPTHR21091:SF18. PTHR21091:SF18. 1 hit.
PfamPF00590. TP_methylase. 1 hit.
[Graphical view]
PIRSFPIRSF005917. MTase_YraL. 1 hit.
SUPFAMSSF53790. Cor/por_Metransf. 1 hit.
TIGRFAMsTIGR00096. TIGR00096. 1 hit.
PROSITEPS01296. RSMI. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRSMI_VIBCH
AccessionPrimary (citable) accession number: Q9KUD9
Entry history
Integrated into UniProtKB/Swiss-Prot: November 2, 2001
Last sequence update: October 1, 2000
Last modified: January 25, 2012
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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