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Protein

Uncharacterized response regulatory protein VC_0693

Gene

VC_0693

Organism
Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  • DNA binding Source: UniProtKB-KW
  • phosphorelay response regulator activity Source: TIGR

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation, Two-component regulatory system

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciVCHO:VC0693-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized response regulatory protein VC_0693
Gene namesi
Ordered Locus Names:VC_0693
OrganismiVibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Taxonomic identifieri243277 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
Proteomesi
  • UP000000584 Componenti: Chromosome 1

Subcellular locationi

GO - Cellular componenti

  • intracellular Source: GOC
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 237237Uncharacterized response regulatory protein VC_0693PRO_0000081370Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei54 – 5414-aspartylphosphatePROSITE-ProRule annotation

Keywords - PTMi

Phosphoprotein

Interactioni

Protein-protein interaction databases

STRINGi243277.VC0693.

Structurei

3D structure databases

ProteinModelPortaliQ9KU36.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini3 – 116114Response regulatoryPROSITE-ProRule annotationAdd
BLAST
Domaini135 – 236102HTH LytTR-typePROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 HTH LytTR-type DNA-binding domain.PROSITE-ProRule annotation
Contains 1 response regulatory domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG4108NEV. Bacteria.
COG3279. LUCA.
KOiK02477.
OMAiIEIIGQC.
OrthoDBiEOG64R63J.

Family and domain databases

InterProiIPR011006. CheY-like_superfamily.
IPR007492. LytTR_DNA-bd_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF04397. LytTR. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
SMARTiSM00850. LytTR. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
PROSITEiPS50930. HTH_LYTTR. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9KU36-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSALLIDDE RFAREELAEL LAESGQIEVI GQASNAIEGL KKINQLKPDV
60 70 80 90 100
VFLDIQMPQI SGIELLSMLD PETMPEVVFV TAYDQYALQA FEDNAFDYLL
110 120 130 140 150
KPVDTERLAK TVQRLLRQHK KSDYSPLTQP SLDQIPCTGL NRIVLLPINE
160 170 180 190 200
VEFAYSDISG VNVQTAQQKA TSQLTLKVLE EKTALVRCHR QYLVNLKAIR
210 220 230
EIKLLENGLA EMITHAGHKV PVSRRYLKEL KEMLGFY
Length:237
Mass (Da):26,856
Last modified:October 1, 2000 - v1
Checksum:i58ADBFD9FF61D519
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE003852 Genomic DNA. Translation: AAF93858.1.
PIRiB82292.
RefSeqiNP_230342.1. NC_002505.1.
WP_000947378.1. NC_002505.1.

Genome annotation databases

EnsemblBacteriaiAAF93858; AAF93858; VC_0693.
GeneIDi2615482.
KEGGivch:VC0693.
PATRICi20080501. VBIVibCho83274_0664.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE003852 Genomic DNA. Translation: AAF93858.1.
PIRiB82292.
RefSeqiNP_230342.1. NC_002505.1.
WP_000947378.1. NC_002505.1.

3D structure databases

ProteinModelPortaliQ9KU36.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243277.VC0693.

Protocols and materials databases

DNASUi2615482.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAF93858; AAF93858; VC_0693.
GeneIDi2615482.
KEGGivch:VC0693.
PATRICi20080501. VBIVibCho83274_0664.

Phylogenomic databases

eggNOGiENOG4108NEV. Bacteria.
COG3279. LUCA.
KOiK02477.
OMAiIEIIGQC.
OrthoDBiEOG64R63J.

Enzyme and pathway databases

BioCyciVCHO:VC0693-MONOMER.

Family and domain databases

InterProiIPR011006. CheY-like_superfamily.
IPR007492. LytTR_DNA-bd_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF04397. LytTR. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
SMARTiSM00850. LytTR. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
PROSITEiPS50930. HTH_LYTTR. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 39315 / El Tor Inaba N16961.

Entry informationi

Entry nameiY693_VIBCH
AccessioniPrimary (citable) accession number: Q9KU36
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 23, 2003
Last sequence update: October 1, 2000
Last modified: November 11, 2015
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.