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Q9KTU5 (OADB_VIBCH) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Probable oxaloacetate decarboxylase beta chain
EC=4.1.1.3
Gene names
Name:oadB
Ordered Locus Names:VC_0792
OrganismVibrio cholerae
Taxonomic identifier666 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio

Protein attributes

Sequence length433 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Lyase and sodium transporter By similarity.

Catalytic activity

Oxaloacetate = pyruvate + CO2.

Cofactor

Sodium By similarity.

Subunit structure

Heterotrimer of an alpha, a beta and a gamma subunit By similarity.

Subcellular location

Cell membrane; Multi-pass membrane protein By similarity.

Sequence similarities

Belongs to the gcdB/mmdB/oadB family.

Ontologies

Keywords
   Biological processIon transport
Sodium transport
Transport
   Cellular componentCell membrane
Membrane
   DomainTransmembrane
Transmembrane helix
   LigandSodium
   Molecular functionDecarboxylase
Lyase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processsodium ion transport

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular componentintegral to membrane

Inferred from electronic annotation. Source: UniProtKB-KW

plasma membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionoxaloacetate decarboxylase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 433433Probable oxaloacetate decarboxylase beta chain
PRO_0000218567

Regions

Transmembrane13 – 3523Helical; Potential
Transmembrane125 – 14723Helical; Potential
Transmembrane162 – 18423Helical; Potential
Transmembrane189 – 21123Helical; Potential
Transmembrane215 – 23723Helical; Potential
Transmembrane267 – 28923Helical; Potential
Transmembrane309 – 32820Helical; Potential
Transmembrane340 – 36223Helical; Potential
Transmembrane404 – 42623Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
Q9KTU5 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: 57AFA12E5B9B62C8

FASTA43345,599
        10         20         30         40         50         60 
MENILAMVRD FGLFHLQWGQ GIMILVGLVL LYLAIVKRFE PLLLVPIGFG GILSNLPDAG 

        70         80         90        100        110        120 
LAMSAIENAV YAAKPEVMTA FSEVLQLSSY MPADIKQALS SATPLQMTTL HLLAEQYQYS 

       130        140        150        160        170        180 
DGMLYLFYSI AIASGAGPLI IFMGVGAMTD FGPLLANPKT LLLGAAAQFG IFTTVLGALA 

       190        200        210        220        230        240 
LSSLGVMDFS VAQAAAIGII GGADGPTAIY VSSMLAPELL GAIAVAAYSY MALVPMIQPP 

       250        260        270        280        290        300 
IMRALTTQEE RKIQMQQLRQ VHKLEKIGFP LLLLILIALL LPSATPLLGM FCFGNLMREC 

       310        320        330        340        350        360 
GVVERLSDTA QNALINIVTI FLGLSVGSKL MADKFLQPQT IGILVLGIVA FCVGTAAGVL 

       370        380        390        400        410        420 
MAKLMNRFST TKLNPLIGSA GVSAVPMAAR VSNKVGLEAN AQNFLLMHAM GPNVAGVIGS 

       430 
AVAAGVMIKY VMG

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE003852 Genomic DNA. Translation: AAF93957.1.
PIRD82280.
RefSeqNP_230441.1. NC_002505.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID2615335.
GenomeReviewsGene locus VC_0792 in contig AE003852_GR.
KEGGvch:VC0792.
PATRIC20080691. VBIVibCho83274_0754.
TIGRVC_0792.

Phylogenomic databases

HOGENOMHBG474553.
OMADHQNFLL.
ProtClustDBCLSK2517505.

Family and domain databases

InterProIPR005661. OadB_MmdB.
[Graphical view]
KOK01572.
PfamPF03977. OAD_beta. 1 hit.
[Graphical view]
PIRSFPIRSF015658. MmdB_OadB. 1 hit.
TIGRFAMsTIGR01109. Na_pump_decarbB. 1 hit.
ProtoNetSearch...

Entry information

Entry nameOADB_VIBCH
AccessionPrimary (citable) accession number: Q9KTU5
Entry history
Integrated into UniProtKB/Swiss-Prot: June 20, 2001
Last sequence update: October 1, 2000
Last modified: January 25, 2012
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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