Q9KTU0 (Q9KTU0_VIBCH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Citrate lyase, beta subunit EMBL AAF93962.1

Gene names

Ordered Locus Names:

VC_0798

Organism

Vibrio cholerae

Taxonomic identifier

666 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio

Protein attributes

Sequence length	296 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Ligand	Magnesium PIRSR PIRSR015582-2 SAAS SAAS005000 Metal-binding PIRSR PIRSR015582-2 SAAS SAAS005000
Molecular function	Lyase EMBL AAF93962.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	acetyl-CoA metabolic process Inferred from electronic annotation. Source: InterPro cellular aromatic compound metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	citrate lyase complex Inferred from electronic annotation. Source: InterPro
Molecular function	citrate (pro-3S)-lyase activity Inferred from electronic annotation. Source: InterPro citryl-CoA lyase activity Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Metal binding	135	1	Magnesium By similarity PIRSR PIRSR015582-2
	Metal binding	162	1	Magnesium By similarity PIRSR PIRSR015582-2
	Binding site	72	1	Substrate By similarity PIRSR PIRSR015582-1
	Binding site	135	1	Substrate By similarity PIRSR PIRSR015582-1

Sequences

	Sequence		Length	Mass (Da)
	Q9KTU0 [UniParc]. Last modified October 1, 2000. Version 1. Checksum: 279465664CED63CD	FASTA	296	32,717
	10 20 30 40 50 60 MEPAIMTKLR RSMLFVPGAN AAMLSNTFIY QPDSIMFDLE DSVALREKDT ARMLVFHALQ 70 80 90 100 110 120 HPMYQEMETV VRVNPLDSEF GIKDLNAVVR XGAKVVRLPK TDNANDVIEM EKVIEQIERA 130 140 150 160 170 180 CGREVGSTRM LAAIESAQGI NNAVEIAFSS RRLIGIALGA EDYVRDLRTQ RSAEGIELLF 190 200 210 220 230 240 ARCSILQAAR AAGIMAFDTV YSDANNEEGF LREAEHIKQL GFDGKSLINP RQIDLLHNVF 250 260 270 280 290 APTQKEVDHA IAVIEAAEEA AAKGLGVVSL NGKMVDGPII ERARWTLQRA ESGIKH

References

[1]

"DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae." Heidelberg J.F., Eisen J.A., Nelson W.C., Clayton R.A., Gwinn M.L., Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Umayam L.A., Gill S.R., Nelson K.E., Read T.D., Tettelin H., Richardson D.L., Ermolaeva M.D., Vamathevan J.J., Bass S. , Qin H., Dragoi I., Sellers P., McDonald L.A., Utterback T.R., Fleischmann R.D., Nierman W.C., White O., Salzberg S.L., Smith H.O., Colwell R.R., Mekalanos J.J., Venter J.C., Fraser C.M. Nature 406:477-483(2000) [PubMed: 10952301] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 39315 / El Tor Inaba N16961 / Serotype O1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE003852 Genomic DNA. Translation: AAF93962.1.
PIR	H82277.
RefSeq	NP_230447.1. NC_002505.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2615341.
GenomeReviews	Gene locus VC_0798 in contig AE003852_GR.
KEGG	vch:VC0798.
PATRIC	20080705. VBIVibCho83274_0761.
TIGR	VC_0798.
Phylogenomic databases
HOGENOM	HBG676713.
OMA	TDMKTHR.
PhylomeDB	Q9KTU0.
ProtClustDB	CLSK874112.
Family and domain databases
InterPro	IPR005000. Aldehyde-lyase_domain. IPR011206. Citrate_lyase_beta. IPR006475. Citrate_lyase_beta_bac. IPR015813. Pyrv/PenolPyrv_Kinase. [Graphical view]
Gene3D	G3DSA:3.20.20.60. Pyrv/PenolPyrv_Kinase_cat. 1 hit.
KO	K01644.
PANTHER	PTHR11105. PTHR11105. 1 hit.
Pfam	PF03328. HpcH_HpaI. 1 hit. [Graphical view]
PIRSF	PIRSF015582. Cit_lyase_B. 1 hit.
SUPFAM	SSF51621. Pyrv/PenolPyrv_Kinase_cat. 1 hit.
TIGRFAMs	TIGR01588. CitE. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q9KTU0_VIBCH

Accession

Primary (citable) accession number: Q9KTU0

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2000
Last sequence update:	October 1, 2000
Last modified:	December 14, 2011
This is version 55 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)