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Protein
Submitted name:

UDP-N-acetylglucosamine 2-epimerase

Gene

VC_0917

Organism
Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • UDP-N-acetylglucosamine 2-epimerase activity Source: TIGR

GO - Biological processi

  • O antigen biosynthetic process Source: TIGR
  • polysaccharide biosynthetic process Source: TIGR
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotation

Enzyme and pathway databases

BioCyciVCHO:VC0917-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
UDP-N-acetylglucosamine 2-epimeraseImported
Gene namesi
Ordered Locus Names:VC_0917Imported
OrganismiVibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)Imported
Taxonomic identifieri243277 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
Proteomesi
  • UP000000584 Componenti: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi243277.VC0917.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3DZCX-ray2.35A/B1-372[»]
ProteinModelPortaliQ9KTI5.
SMRiQ9KTI5. Positions 3-370.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9KTI5.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini23 – 370348Epimerase_2InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the UDP-N-acetylglucosamine 2-epimerase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105EAG. Bacteria.
COG0381. LUCA.
KOiK01791.
OMAiIMKERQT.

Family and domain databases

InterProiIPR003331. UDP_GlcNAc_Epimerase_2_dom.
IPR029767. WecB-like.
[Graphical view]
PANTHERiPTHR18964:SF2. PTHR18964:SF2. 1 hit.
PfamiPF02350. Epimerase_2. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00236. wecB. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9KTI5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKVLIVFGT RPEAIKMAPL VQQLCQDNRF VAKVCVTGQH REMLDQVLEL
60 70 80 90 100
FSITPDFDLN IMEPGQTLNG VTSKILLGMQ QVLSSEQPDV VLVHGDTATT
110 120 130 140 150
FAASLAAYYQ QIPVGHVEAG LRTGNIYSPW PEEGNRKLTA ALTQYHFAPT
160 170 180 190 200
DTSRANLLQE NYNAENIFVT GNTVIDALLA VREKIHTDMD LQATLESQFP
210 220 230 240 250
MLDASKKLIL VTGHRRESFG GGFERICQAL ITTAEQHPEC QILYPVHLNP
260 270 280 290 300
NVREPVNKLL KGVSNIVLIE PQQYLPFVYL MDRAHIILTD SGGIQEEAPS
310 320 330 340 350
LGKPVLVMRE TTERPEAVAA GTVKLVGTNQ QQICDALSLL LTDPQAYQAM
360 370
SQAHNPYGDG KACQRIADIL AK
Length:372
Mass (Da):41,040
Last modified:October 1, 2000 - v1
Checksum:i4D550543E08F75AE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE003852 Genomic DNA. Translation: AAF94079.1.
PIRiA82264.
RefSeqiNP_230564.1. NC_002505.1.
WP_000756756.1. NC_002505.1.

Genome annotation databases

EnsemblBacteriaiAAF94079; AAF94079; VC_0917.
GeneIDi2614137.
KEGGivch:VC0917.
PATRICi20080936. VBIVibCho83274_0872.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE003852 Genomic DNA. Translation: AAF94079.1.
PIRiA82264.
RefSeqiNP_230564.1. NC_002505.1.
WP_000756756.1. NC_002505.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3DZCX-ray2.35A/B1-372[»]
ProteinModelPortaliQ9KTI5.
SMRiQ9KTI5. Positions 3-370.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243277.VC0917.

Protocols and materials databases

DNASUi2614137.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAF94079; AAF94079; VC_0917.
GeneIDi2614137.
KEGGivch:VC0917.
PATRICi20080936. VBIVibCho83274_0872.

Phylogenomic databases

eggNOGiENOG4105EAG. Bacteria.
COG0381. LUCA.
KOiK01791.
OMAiIMKERQT.

Enzyme and pathway databases

BioCyciVCHO:VC0917-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ9KTI5.

Family and domain databases

InterProiIPR003331. UDP_GlcNAc_Epimerase_2_dom.
IPR029767. WecB-like.
[Graphical view]
PANTHERiPTHR18964:SF2. PTHR18964:SF2. 1 hit.
PfamiPF02350. Epimerase_2. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00236. wecB. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ9KTI5_VIBCH
AccessioniPrimary (citable) accession number: Q9KTI5
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: September 7, 2016
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.