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Protein

Aminotransferase

Gene

VC_1293

Organism
Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseUniRule annotationImported, Transferase

Enzyme and pathway databases

BioCyciVCHO:VC1293-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
AminotransferaseUniRule annotation (EC:2.6.1.-UniRule annotation)
Gene namesi
Ordered Locus Names:VC_1293Imported
OrganismiVibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)Imported
Taxonomic identifieri243277 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
Proteomesi
  • UP000000584 Componenti: Chromosome 1

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi243277.VC1293.

Structurei

3D structure databases

ProteinModelPortaliQ9KSG3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini43 – 409Aminotran_1_2InterPro annotationAdd BLAST367

Sequence similaritiesi

Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CGF. Bacteria.
COG1448. LUCA.
OMAiPNHKGVF.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9KSG3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMSSIIPSHP NLTWMCFMFE KVVAAPADPI LGLTEEFKKD PRTDKINLGV
60 70 80 90 100
GIYKNEAGET PVLATVKKAE AALLESEKTK SYLTIEGTAE YGLAVQKLLF
110 120 130 140 150
GANSDIVTQK LAKTAQAPGG TGALRVAGEF IKRQLGDVKV WISNPTWANH
160 170 180 190 200
HGVFNAAGLE TTQYAYYDAK AKDKDFAAML ADLEQAEKGD VVLLHGCCHN
210 220 230 240 250
PTGIDPTEQE WEVLAKLVAD KGLLPLFDFA YQGFASGVEE DAAGLRIFAK
260 270 280 290 300
YNSEILVASS FSKNFGLYNE RVGAFTLVAP STTVAETAFS QVKAIIRSIY
310 320 330 340 350
SNPPAHGAAV VTYILNNPEL RAEWEAEVAE MRERIQEMRV LFVNTLKEVG
360 370 380 390 400
VDADFSFIER QNGMFSFSGL SKEQVARLKS ELGIYIVGSG RISVAGMTKS
410
NMLPLCQGIA AVM
Length:413
Mass (Da):44,925
Last modified:October 1, 2000 - v1
Checksum:iB41FBFEF9E7CFE74
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE003852 Genomic DNA. Translation: AAF94452.1.
PIRiA82217.

Genome annotation databases

EnsemblBacteriaiAAF94452; AAF94452; VC_1293.
PATRICi20081664. VBIVibCho83274_1231.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE003852 Genomic DNA. Translation: AAF94452.1.
PIRiA82217.

3D structure databases

ProteinModelPortaliQ9KSG3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243277.VC1293.

Protocols and materials databases

DNASUi2614747.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAF94452; AAF94452; VC_1293.
PATRICi20081664. VBIVibCho83274_1231.

Phylogenomic databases

eggNOGiENOG4105CGF. Bacteria.
COG1448. LUCA.
OMAiPNHKGVF.

Enzyme and pathway databases

BioCyciVCHO:VC1293-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ9KSG3_VIBCH
AccessioniPrimary (citable) accession number: Q9KSG3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: October 5, 2016
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.