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Q9KS45

- Q9KS45_VIBCH

UniProt

Q9KS45 - Q9KS45_VIBCH

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Protein
Submitted name:

VgrG protein

Gene

VC_1416

Organism
Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei808 – 8081ADP; via carbonyl oxygenImported

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi739 – 7424ADPImported

GO - Molecular functioni

  1. nucleotide binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Ligandi

Nucleotide-bindingImported

Enzyme and pathway databases

BioCyciVCHO:VC1416-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
VgrG proteinImported
Gene namesi
Ordered Locus Names:VC_1416Imported
OrganismiVibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)Imported
Taxonomic identifieri243277 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000000584: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi243277.VC1416.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4GQKX-ray2.36A717-1111[»]
ProteinModelPortaliQ9KS45.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK11904.
OMAiLIENDQF.
OrthoDBiEOG69SK6H.

Family and domain databases

Gene3Di2.40.50.230. 1 hit.
InterProiIPR006531. Gp5_N-like_dom.
IPR017847. T6SS_RhsGE_Vgr_subset.
IPR006533. T6SS_Vgr_RhsGE.
[Graphical view]
PfamiPF04717. Phage_base_V. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01646. vgr_GE. 1 hit.
TIGR03361. VI_Rhs_Vgr. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9KS45-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MATLAYSIEV EGLEDETLVV RGFHGQESLS NSVFLGQACY GFRYEVQLAS
60 70 80 90 100
RVSNLTAEQM VDKRAELKLY RNSQLVQRVH GIVRAFSQGD IGHHHTFYQL
110 120 130 140 150
TLVPALERLS LRHNSRIFQK QTVPEILSIL LQEMGINDYA FALKRDGVQR
160 170 180 190 200
EFCVQYRESD IDFLHRLAAE EGLVYSFVHE AGKHTLYFSD ASDSLSKLPE
210 220 230 240 250
PIPYNALVGG AIDTPYIHGL TYRTQAEVSE VQLKDYSFKK PAYSFLQTVQ
260 270 280 290 300
GTELDYQQTR YQHFDAPGRY KDDVNGAAFS QIRLDYLRRH AHTATGQSNE
310 320 330 340 350
PLLRAGYKFD LQEHLDPAMN RDWVVVSINH QGEQPQALQE DGGSGATTYS
360 370 380 390 400
NQFSLIPGHL HWRAEPQPKP QVDGPMIATV VGPEGEEIFC DEHGRVKIHF
410 420 430 440 450
PWDRYSNGNE QSSCWVRVSQ GWAGSQYGFI AIPRIGHEVI VEFLNGDPDQ
460 470 480 490 500
PIITGRTYHA TNTPPYTLPE HKTKTVLRTE THQGEGFNEL SFEDQAGKEQ
510 520 530 540 550
IYLHAQKDFD GLIENDHTTV IRHDHHLTVE NDQFTQIKHN QHLTVEWESR
560 570 580 590 600
EAVTGEQVLS IEGSLHVKTG KVWVNEAGTE IHVKAGQKVV IEAGSEITVK
610 620 630 640 650
AGGSFVKVDP AGVHLSGALV NLNSGGSAGS GSGFGGAMPA LPGGLEPAVA
660 670 680 690 700
LAPPQTISYQ ALLQAEQANV PAVKVCPLAA QEATPAVNSI TPPPPPPIAP
710 720 730 740 750
PMAPPQPIMN PQPTANAQPN LGRSTKATPD FPTHFPKSSI GIENELAGLV
760 770 780 790 800
VAMPANSAQK FGYVKSAQGD ALFMLTKDMN QGSYQRPPSL QDGKNYQNWQ
810 820 830 840 850
THTVELVSYP CEMDDKAAVE TRKQAMLWLA THFTTHIDQS NHQPLAPIQS
860 870 880 890 900
EDGRFVIEIT NAKHVIAAGN GISAESQGQT ITMTPSGQQA TVGVAAKGFG
910 920 930 940 950
TSATPELRLL ESAPWYQKSL KSQFASLTSA ENLDDKELAA NVFAYLTSIY
960 970 980 990 1000
LKTAELAKKF GIYINEWDPM SEQITPNANG LTDPKVKNAW EILPRTKPSK
1010 1020 1030 1040 1050
IVEILSKSDA KAVMKHIKPQ LQSRYSESLS KNVFQYFQDG GEVAGHGINN
1060 1070 1080 1090 1100
ATVGDKHSPE LAILFEFRTV PNELQSYLPK TESTTKSEVK LLDQFDPMKR
1110 1120 1130 1140 1150
KTVIQQVESL VQNSGDAFDK WYQSYRDSMN QPPVKNAKKI ASANQKAQWV
1160
KEHNPQEWQR IIA
Length:1,163
Mass (Da):128,829
Last modified:October 1, 2000 - v1
Checksum:iFF95DFEC31FE9F15
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE003852 Genomic DNA. Translation: AAF94573.1.
PIRiD82202.
RefSeqiNP_231059.1. NC_002505.1.

Genome annotation databases

EnsemblBacteriaiAAF94573; AAF94573; VC_1416.
GeneIDi2614048.
KEGGivch:VC1416.
PATRICi20081892. VBIVibCho83274_1345.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE003852 Genomic DNA. Translation: AAF94573.1 .
PIRi D82202.
RefSeqi NP_231059.1. NC_002505.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4GQK X-ray 2.36 A 717-1111 [» ]
ProteinModelPortali Q9KS45.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 243277.VC1416.

Protocols and materials databases

DNASUi 2614048.
Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAF94573 ; AAF94573 ; VC_1416 .
GeneIDi 2614048.
KEGGi vch:VC1416.
PATRICi 20081892. VBIVibCho83274_1345.

Phylogenomic databases

KOi K11904.
OMAi LIENDQF.
OrthoDBi EOG69SK6H.

Enzyme and pathway databases

BioCyci VCHO:VC1416-MONOMER.

Family and domain databases

Gene3Di 2.40.50.230. 1 hit.
InterProi IPR006531. Gp5_N-like_dom.
IPR017847. T6SS_RhsGE_Vgr_subset.
IPR006533. T6SS_Vgr_RhsGE.
[Graphical view ]
Pfami PF04717. Phage_base_V. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR01646. vgr_GE. 1 hit.
TIGR03361. VI_Rhs_Vgr. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 39315 / El Tor Inaba N16961Imported.
  2. "Structure of Native VgrG1-ACD with ADP (no cations)."
    Nguyen V.S., Spinelli S., Derrez E., Durand E., Cambillau C
    Submitted (AUG-2012) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.36 ANGSTROMS) OF 717-1111 IN COMPLEX WITH ADP.

Entry informationi

Entry nameiQ9KS45_VIBCH
AccessioniPrimary (citable) accession number: Q9KS45
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: October 29, 2014
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteomeImported

External Data

Dasty 3