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Q9KS45

- Q9KS45_VIBCH

UniProt

Q9KS45 - Q9KS45_VIBCH

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Protein
Submitted name: VgrG protein
Gene
VC_1416
Organism
Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei808 – 8081ADP; via carbonyl oxygenImported

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi739 – 7424ADPImported

GO - Molecular functioni

  1. nucleotide binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Ligandi

Nucleotide-bindingImported

Enzyme and pathway databases

BioCyciVCHO:VC1416-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
VgrG proteinImported
Gene namesi
Ordered Locus Names:VC_1416Imported
OrganismiVibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)Imported
Taxonomic identifieri243277 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000000584: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi243277.VC1416.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4GQKX-ray2.36A717-1111[»]
ProteinModelPortaliQ9KS45.

Family & Domainsi

Phylogenomic databases

KOiK11904.
OMAiLIENDQF.
OrthoDBiEOG69SK6H.

Family and domain databases

Gene3Di2.40.50.230. 1 hit.
InterProiIPR006531. Gp5_N-like_dom.
IPR017847. T6SS_RhsGE_Vgr_subset.
IPR006533. T6SS_Vgr_RhsGE.
[Graphical view]
PfamiPF04717. Phage_base_V. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01646. vgr_GE. 1 hit.
TIGR03361. VI_Rhs_Vgr. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9KS45-1 [UniParc]FASTAAdd to Basket

« Hide

MATLAYSIEV EGLEDETLVV RGFHGQESLS NSVFLGQACY GFRYEVQLAS     50
RVSNLTAEQM VDKRAELKLY RNSQLVQRVH GIVRAFSQGD IGHHHTFYQL 100
TLVPALERLS LRHNSRIFQK QTVPEILSIL LQEMGINDYA FALKRDGVQR 150
EFCVQYRESD IDFLHRLAAE EGLVYSFVHE AGKHTLYFSD ASDSLSKLPE 200
PIPYNALVGG AIDTPYIHGL TYRTQAEVSE VQLKDYSFKK PAYSFLQTVQ 250
GTELDYQQTR YQHFDAPGRY KDDVNGAAFS QIRLDYLRRH AHTATGQSNE 300
PLLRAGYKFD LQEHLDPAMN RDWVVVSINH QGEQPQALQE DGGSGATTYS 350
NQFSLIPGHL HWRAEPQPKP QVDGPMIATV VGPEGEEIFC DEHGRVKIHF 400
PWDRYSNGNE QSSCWVRVSQ GWAGSQYGFI AIPRIGHEVI VEFLNGDPDQ 450
PIITGRTYHA TNTPPYTLPE HKTKTVLRTE THQGEGFNEL SFEDQAGKEQ 500
IYLHAQKDFD GLIENDHTTV IRHDHHLTVE NDQFTQIKHN QHLTVEWESR 550
EAVTGEQVLS IEGSLHVKTG KVWVNEAGTE IHVKAGQKVV IEAGSEITVK 600
AGGSFVKVDP AGVHLSGALV NLNSGGSAGS GSGFGGAMPA LPGGLEPAVA 650
LAPPQTISYQ ALLQAEQANV PAVKVCPLAA QEATPAVNSI TPPPPPPIAP 700
PMAPPQPIMN PQPTANAQPN LGRSTKATPD FPTHFPKSSI GIENELAGLV 750
VAMPANSAQK FGYVKSAQGD ALFMLTKDMN QGSYQRPPSL QDGKNYQNWQ 800
THTVELVSYP CEMDDKAAVE TRKQAMLWLA THFTTHIDQS NHQPLAPIQS 850
EDGRFVIEIT NAKHVIAAGN GISAESQGQT ITMTPSGQQA TVGVAAKGFG 900
TSATPELRLL ESAPWYQKSL KSQFASLTSA ENLDDKELAA NVFAYLTSIY 950
LKTAELAKKF GIYINEWDPM SEQITPNANG LTDPKVKNAW EILPRTKPSK 1000
IVEILSKSDA KAVMKHIKPQ LQSRYSESLS KNVFQYFQDG GEVAGHGINN 1050
ATVGDKHSPE LAILFEFRTV PNELQSYLPK TESTTKSEVK LLDQFDPMKR 1100
KTVIQQVESL VQNSGDAFDK WYQSYRDSMN QPPVKNAKKI ASANQKAQWV 1150
KEHNPQEWQR IIA 1163
Length:1,163
Mass (Da):128,829
Last modified:October 1, 2000 - v1
Checksum:iFF95DFEC31FE9F15
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE003852 Genomic DNA. Translation: AAF94573.1.
PIRiD82202.
RefSeqiNP_231059.1. NC_002505.1.

Genome annotation databases

EnsemblBacteriaiAAF94573; AAF94573; VC_1416.
GeneIDi2614048.
KEGGivch:VC1416.
PATRICi20081892. VBIVibCho83274_1345.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE003852 Genomic DNA. Translation: AAF94573.1 .
PIRi D82202.
RefSeqi NP_231059.1. NC_002505.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4GQK X-ray 2.36 A 717-1111 [» ]
ProteinModelPortali Q9KS45.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 243277.VC1416.

Protocols and materials databases

DNASUi 2614048.
Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAF94573 ; AAF94573 ; VC_1416 .
GeneIDi 2614048.
KEGGi vch:VC1416.
PATRICi 20081892. VBIVibCho83274_1345.

Phylogenomic databases

KOi K11904.
OMAi LIENDQF.
OrthoDBi EOG69SK6H.

Enzyme and pathway databases

BioCyci VCHO:VC1416-MONOMER.

Family and domain databases

Gene3Di 2.40.50.230. 1 hit.
InterProi IPR006531. Gp5_N-like_dom.
IPR017847. T6SS_RhsGE_Vgr_subset.
IPR006533. T6SS_Vgr_RhsGE.
[Graphical view ]
Pfami PF04717. Phage_base_V. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR01646. vgr_GE. 1 hit.
TIGR03361. VI_Rhs_Vgr. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 39315 / El Tor Inaba N16961.
  2. "Structure of Native VgrG1-ACD with ADP (no cations)."
    Nguyen V.S., Spinelli S., Derrez E., Durand E., Cambillau C
    Submitted (AUG-2012) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.36 ANGSTROMS) OF 717-1111 IN COMPLEX WITH ADP.

Entry informationi

Entry nameiQ9KS45_VIBCH
AccessioniPrimary (citable) accession number: Q9KS45
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: September 3, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteome

External Data

Dasty 3

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