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Q9KS45

- Q9KS45_VIBCH

UniProt

Q9KS45 - Q9KS45_VIBCH

Protein
Submitted name:

VgrG protein

Gene

VC_1416

Organism
Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 63 (01 Oct 2014)
      Sequence version 1 (01 Oct 2000)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei808 – 8081ADP; via carbonyl oxygenImported

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi739 – 7424ADPImported

    GO - Molecular functioni

    1. nucleotide binding Source: UniProtKB-KW

    Keywords - Ligandi

    Nucleotide-bindingImported

    Enzyme and pathway databases

    BioCyciVCHO:VC1416-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    VgrG proteinImported
    Gene namesi
    Ordered Locus Names:VC_1416Imported
    OrganismiVibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)Imported
    Taxonomic identifieri243277 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000000584: Chromosome 1

    Interactioni

    Protein-protein interaction databases

    STRINGi243277.VC1416.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4GQKX-ray2.36A717-1111[»]
    ProteinModelPortaliQ9KS45.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK11904.
    OMAiLIENDQF.
    OrthoDBiEOG69SK6H.

    Family and domain databases

    Gene3Di2.40.50.230. 1 hit.
    InterProiIPR006531. Gp5_N-like_dom.
    IPR017847. T6SS_RhsGE_Vgr_subset.
    IPR006533. T6SS_Vgr_RhsGE.
    [Graphical view]
    PfamiPF04717. Phage_base_V. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR01646. vgr_GE. 1 hit.
    TIGR03361. VI_Rhs_Vgr. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q9KS45-1 [UniParc]FASTAAdd to Basket

    « Hide

    MATLAYSIEV EGLEDETLVV RGFHGQESLS NSVFLGQACY GFRYEVQLAS     50
    RVSNLTAEQM VDKRAELKLY RNSQLVQRVH GIVRAFSQGD IGHHHTFYQL 100
    TLVPALERLS LRHNSRIFQK QTVPEILSIL LQEMGINDYA FALKRDGVQR 150
    EFCVQYRESD IDFLHRLAAE EGLVYSFVHE AGKHTLYFSD ASDSLSKLPE 200
    PIPYNALVGG AIDTPYIHGL TYRTQAEVSE VQLKDYSFKK PAYSFLQTVQ 250
    GTELDYQQTR YQHFDAPGRY KDDVNGAAFS QIRLDYLRRH AHTATGQSNE 300
    PLLRAGYKFD LQEHLDPAMN RDWVVVSINH QGEQPQALQE DGGSGATTYS 350
    NQFSLIPGHL HWRAEPQPKP QVDGPMIATV VGPEGEEIFC DEHGRVKIHF 400
    PWDRYSNGNE QSSCWVRVSQ GWAGSQYGFI AIPRIGHEVI VEFLNGDPDQ 450
    PIITGRTYHA TNTPPYTLPE HKTKTVLRTE THQGEGFNEL SFEDQAGKEQ 500
    IYLHAQKDFD GLIENDHTTV IRHDHHLTVE NDQFTQIKHN QHLTVEWESR 550
    EAVTGEQVLS IEGSLHVKTG KVWVNEAGTE IHVKAGQKVV IEAGSEITVK 600
    AGGSFVKVDP AGVHLSGALV NLNSGGSAGS GSGFGGAMPA LPGGLEPAVA 650
    LAPPQTISYQ ALLQAEQANV PAVKVCPLAA QEATPAVNSI TPPPPPPIAP 700
    PMAPPQPIMN PQPTANAQPN LGRSTKATPD FPTHFPKSSI GIENELAGLV 750
    VAMPANSAQK FGYVKSAQGD ALFMLTKDMN QGSYQRPPSL QDGKNYQNWQ 800
    THTVELVSYP CEMDDKAAVE TRKQAMLWLA THFTTHIDQS NHQPLAPIQS 850
    EDGRFVIEIT NAKHVIAAGN GISAESQGQT ITMTPSGQQA TVGVAAKGFG 900
    TSATPELRLL ESAPWYQKSL KSQFASLTSA ENLDDKELAA NVFAYLTSIY 950
    LKTAELAKKF GIYINEWDPM SEQITPNANG LTDPKVKNAW EILPRTKPSK 1000
    IVEILSKSDA KAVMKHIKPQ LQSRYSESLS KNVFQYFQDG GEVAGHGINN 1050
    ATVGDKHSPE LAILFEFRTV PNELQSYLPK TESTTKSEVK LLDQFDPMKR 1100
    KTVIQQVESL VQNSGDAFDK WYQSYRDSMN QPPVKNAKKI ASANQKAQWV 1150
    KEHNPQEWQR IIA 1163
    Length:1,163
    Mass (Da):128,829
    Last modified:October 1, 2000 - v1
    Checksum:iFF95DFEC31FE9F15
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE003852 Genomic DNA. Translation: AAF94573.1.
    PIRiD82202.
    RefSeqiNP_231059.1. NC_002505.1.

    Genome annotation databases

    EnsemblBacteriaiAAF94573; AAF94573; VC_1416.
    GeneIDi2614048.
    KEGGivch:VC1416.
    PATRICi20081892. VBIVibCho83274_1345.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE003852 Genomic DNA. Translation: AAF94573.1 .
    PIRi D82202.
    RefSeqi NP_231059.1. NC_002505.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4GQK X-ray 2.36 A 717-1111 [» ]
    ProteinModelPortali Q9KS45.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 243277.VC1416.

    Protocols and materials databases

    DNASUi 2614048.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAF94573 ; AAF94573 ; VC_1416 .
    GeneIDi 2614048.
    KEGGi vch:VC1416.
    PATRICi 20081892. VBIVibCho83274_1345.

    Phylogenomic databases

    KOi K11904.
    OMAi LIENDQF.
    OrthoDBi EOG69SK6H.

    Enzyme and pathway databases

    BioCyci VCHO:VC1416-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.230. 1 hit.
    InterProi IPR006531. Gp5_N-like_dom.
    IPR017847. T6SS_RhsGE_Vgr_subset.
    IPR006533. T6SS_Vgr_RhsGE.
    [Graphical view ]
    Pfami PF04717. Phage_base_V. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR01646. vgr_GE. 1 hit.
    TIGR03361. VI_Rhs_Vgr. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 39315 / El Tor Inaba N16961Imported.
    2. "Structure of Native VgrG1-ACD with ADP (no cations)."
      Nguyen V.S., Spinelli S., Derrez E., Durand E., Cambillau C
      Submitted (AUG-2012) to the PDB data bank
      Cited for: X-RAY CRYSTALLOGRAPHY (2.36 ANGSTROMS) OF 717-1111 IN COMPLEX WITH ADP.

    Entry informationi

    Entry nameiQ9KS45_VIBCH
    AccessioniPrimary (citable) accession number: Q9KS45
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 1, 2000
    Last sequence update: October 1, 2000
    Last modified: October 1, 2014
    This is version 63 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3