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Protein
Submitted name:

Sigma-54 dependent response regulator

Gene

VC_1522

Organism
Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi183 – 190ATPPROSITE-ProRule annotation8
Nucleotide bindingi245 – 254ATPPROSITE-ProRule annotation10

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation
LigandATP-bindingPROSITE-ProRule annotationSAAS annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciVCHO:VC1522-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Sigma-54 dependent response regulatorImported
Gene namesi
Ordered Locus Names:VC_1522Imported
OrganismiVibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)Imported
Taxonomic identifieri243277 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
Proteomesi
  • UP000000584 Componenti: Chromosome 1

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei664-aspartylphosphatePROSITE-ProRule annotation1

Keywords - PTMi

PhosphoproteinPROSITE-ProRule annotation

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi243277.VC1522

Structurei

3D structure databases

ProteinModelPortaliQ9KRW2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini17 – 131Response regulatoryInterPro annotationAdd BLAST115
Domaini155 – 383Sigma-54 factor interactionInterPro annotationAdd BLAST229

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili458 – 478Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG4105C1W Bacteria
COG2204 LUCA
OMAiNEEGLCR

Family and domain databases

CDDicd00156 REC, 1 hit
InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR011006 CheY-like_superfamily
IPR009057 Homeobox-like_sf
IPR002197 HTH_Fis
IPR027417 P-loop_NTPase
IPR001789 Sig_transdc_resp-reg_receiver
IPR002078 Sigma_54_int
IPR025662 Sigma_54_int_dom_ATP-bd_1
IPR025943 Sigma_54_int_dom_ATP-bd_2
IPR025944 Sigma_54_int_dom_CS
PfamiView protein in Pfam
PF02954 HTH_8, 1 hit
PF00072 Response_reg, 1 hit
PF00158 Sigma54_activat, 1 hit
SMARTiView protein in SMART
SM00382 AAA, 1 hit
SM00448 REC, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
SSF52172 SSF52172, 1 hit
SSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS50110 RESPONSE_REGULATORY, 1 hit
PS00675 SIGMA54_INTERACT_1, 1 hit
PS00676 SIGMA54_INTERACT_2, 1 hit
PS00688 SIGMA54_INTERACT_3, 1 hit
PS50045 SIGMA54_INTERACT_4, 1 hit

Sequencei

Sequence statusi: Complete.

Q9KRW2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSPVLDLNQT HLYQAFSVLL VDDEVGMQLV LKKALSKWFS RVDLASSIEE
60 70 80 90 100
AEVLRGEHHY DLLILDINLP GRSGIEWEEA FTDPDHRADV IFMTGFADLE
110 120 130 140 150
TAISALKLGA SDFILKPFNL EQMLQAVQRC MNKRLNERLQ YALQRDFQRH
160 170 180 190 200
CTTQIIGSSV QTELLKQRIV QFAPSRASVL IEGESGTGKE LVARGIHEAS
210 220 230 240 250
GRQGPFVPIN CGAIAPELLE SELFGHTSGA FTGAKKSREG LFRVANGGTL
260 270 280 290 300
FLDEIGEMPL TMQASLLRVL EQRAVRPVGS EKEVNVDVRV VAATNRNLQQ
310 320 330 340 350
EVENGRFRGD LYYRLNVLKI EVSPLRERKQ DLHELLPFFT KMLCAELGMP
360 370 380 390 400
MPKWAYEDIS SMQDYDWPGN IRELKNLIER CLLLGKPPAH YWRELNGLPI
410 420 430 440 450
YAEPEVTMSQ SNNSEISLGD NVTQPSLGYP NDWPLSAVEK AHIQQIVALH
460 470 480
EGNKSAAARD LGVARKTLER KYKEWESEDL SHES
Length:484
Mass (Da):54,522
Last modified:October 1, 2000 - v1
Checksum:iCA64872F009C6E96
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE003852 Genomic DNA Translation: AAF94676.1
PIRiF82190
RefSeqiNP_231162.1, NC_002505.1
WP_000075518.1, NC_002505.1

Genome annotation databases

EnsemblBacteriaiAAF94676; AAF94676; VC_1522
GeneIDi2613901
KEGGivch:VC1522
PATRICifig|243277.26.peg.1450

Similar proteinsi

Entry informationi

Entry nameiQ9KRW2_VIBCH
AccessioniPrimary (citable) accession number: Q9KRW2
Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: May 23, 2018
This is version 128 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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