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Q9KRU2

- Q9KRU2_VIBCH

UniProt

Q9KRU2 - Q9KRU2_VIBCH

Protein
Submitted name:

DNA ligase

Gene

VC_1542

Organism
Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 75 (01 Oct 2014)
      Sequence version 1 (01 Oct 2000)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: TIGR

    GO - Biological processi

    1. DNA ligation Source: TIGR
    2. DNA ligation involved in DNA repair Source: InterPro
    3. DNA recombination Source: TIGR
    4. DNA repair Source: TIGR
    5. DNA replication Source: TIGR

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciVCHO:VC1542-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligaseImported
    Gene namesi
    Ordered Locus Names:VC_1542Imported
    OrganismiVibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)Imported
    Taxonomic identifieri243277 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000000584: Chromosome 1

    Interactioni

    Protein-protein interaction databases

    STRINGi243277.VC1542.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9KRU2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.
    OMAiGKGQFEN.
    OrthoDBiEOG60919Q.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q9KRU2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLIRLTLTAA AIMLAQQTLA NDGPLAFIPI TYANNYQHGI DIFDYWKSEK    50
    LDGIRAIWTG KQLVTRNGNP IAAPAWFTES LPSYSLEGEL WAGRGNFSLV 100
    QQTVLDSQPA DSAWRKISLM LFDMPDAAGD YSKRYYNLIH LVNSLDLKHI 150
    RYVEHTPIKS EAELLSYLDN ISEKSGEGVM LRKISARYQA GRSNDLLKLK 200
    RHQDAEATVI GYRLGMGKYK GKMGSMLVRT AEGLEFYIGS GFSDVERAEP 250
    PKIGSVITYR YNGLTTEGKP RFARFVRVRE NY 282
    Length:282
    Mass (Da):31,815
    Last modified:October 1, 2000 - v1
    Checksum:iE3E5F1D90D43EFDA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE003852 Genomic DNA. Translation: AAF94696.1.
    PIRiB82187.
    RefSeqiNP_231182.1. NC_002505.1.

    Genome annotation databases

    EnsemblBacteriaiAAF94696; AAF94696; VC_1542.
    GeneIDi2613921.
    KEGGivch:VC1542.
    PATRICi20082145. VBIVibCho83274_1471.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE003852 Genomic DNA. Translation: AAF94696.1 .
    PIRi B82187.
    RefSeqi NP_231182.1. NC_002505.1.

    3D structure databases

    ProteinModelPortali Q9KRU2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 243277.VC1542.

    Protocols and materials databases

    DNASUi 2613921.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAF94696 ; AAF94696 ; VC_1542 .
    GeneIDi 2613921.
    KEGGi vch:VC1542.
    PATRICi 20082145. VBIVibCho83274_1471.

    Phylogenomic databases

    KOi K01971.
    OMAi GKGQFEN.
    OrthoDBi EOG60919Q.

    Enzyme and pathway databases

    BioCyci VCHO:VC1542-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 39315 / El Tor Inaba N16961Imported.

    Entry informationi

    Entry nameiQ9KRU2_VIBCH
    AccessioniPrimary (citable) accession number: Q9KRU2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 1, 2000
    Last sequence update: October 1, 2000
    Last modified: October 1, 2014
    This is version 75 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3