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Q9KNB2 (DEOD2_VIBCH) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 73. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Purine nucleoside phosphorylase DeoD-type 2

Short name=PNP 2
EC=2.4.2.1
Gene names
Name:deoD2
Ordered Locus Names:VC_A0053
OrganismVibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) [Reference proteome] [HAMAP]
Taxonomic identifier243277 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length236 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate. HAMAP-Rule MF_01627

Purine deoxynucleoside + phosphate = purine + 2'-deoxy-alpha-D-ribose 1-phosphate. HAMAP-Rule MF_01627

Subunit structure

Homohexamer By similarity. HAMAP-Rule MF_01627

Sequence similarities

Belongs to the PNP/UDP phosphorylase family.

Sequence caution

The sequence AAF95967.1 differs from that shown. Reason: Erroneous initiation.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 236236Purine nucleoside phosphorylase DeoD-type 2 HAMAP-Rule MF_01627
PRO_0000063170

Sequences

Sequence LengthMass (Da)Tools
Q9KNB2 [UniParc].

Last modified January 10, 2006. Version 2.
Checksum: D2DCDCC5740DC5AE

FASTA23625,640
        10         20         30         40         50         60 
MATPHINAQP GDFAETVLMP GDPLRAKYIA ETFLEDVKQV CDVRSMFGFT GTYKGKKVSV 

        70         80         90        100        110        120 
MGHGMGIPSC SIYVHELIAE YGVKNIIRIG SCGAVRDDVK LMDVVIGMGA STDSKVNRIR 

       130        140        150        160        170        180 
FSGHDFAAIA DYDLLETAVN QARAQQVPVK VGNVFSADLF YTPEPEIFEK MKKLGILGVD 

       190        200        210        220        230 
MEAAGIYGVA ADLGARALTI LTVSDHILRG EKLSSEDRQK SFNDMMKVAL ETAINI 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE003853 Genomic DNA. Translation: AAF95967.1. Different initiation.
PIRC82505.
RefSeqNP_232454.2. NC_002506.1.

3D structure databases

ProteinModelPortalQ9KNB2.
SMRQ9KNB2. Positions 2-234.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING243277.VCA0053.

Protocols and materials databases

DNASU2612153.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAF95967; AAF95967; VC_A0053.
GeneID2612153.
KEGGvch:VCA0053.
PATRIC20084695. VBIVibCho83274_2699.

Phylogenomic databases

eggNOGCOG0813.
KOK03784.
OMASGHDFAA.
OrthoDBEOG6BKJC5.
ProtClustDBPRK13374.

Family and domain databases

Gene3D3.40.50.1580. 1 hit.
HAMAPMF_01627. Pur_nucleosid_phosp.
InterProIPR004402. DeoD-type.
IPR018017. Nucleoside_phosphorylase.
IPR018016. Nucleoside_phosphorylase_CS.
IPR000845. Nucleoside_phosphorylase_d.
[Graphical view]
PANTHERPTHR21234. PTHR21234. 1 hit.
PfamPF01048. PNP_UDP_1. 1 hit.
[Graphical view]
SUPFAMSSF53167. SSF53167. 1 hit.
TIGRFAMsTIGR00107. deoD. 1 hit.
PROSITEPS01232. PNP_UDP_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameDEOD2_VIBCH
AccessionPrimary (citable) accession number: Q9KNB2
Entry history
Integrated into UniProtKB/Swiss-Prot: January 10, 2006
Last sequence update: January 10, 2006
Last modified: April 16, 2014
This is version 73 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families