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Q9KMS0

- Q9KMS0_VIBCH

UniProt

Q9KMS0 - Q9KMS0_VIBCH

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Protein

Alpha-amylase

Gene

VC_A0250

Organism
Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: TIGR
  2. cation binding Source: InterPro

GO - Biological processi

  1. oligosaccharide catabolic process Source: TIGR
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciVCHO:VCA0250-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:VC_A0250Imported
OrganismiVibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)Imported
Taxonomic identifieri243277 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000000584: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi243277.VCA0250.

Structurei

3D structure databases

ProteinModelPortaliQ9KMS0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.
OMAiDLDPNNW.
OrthoDBiEOG6K6V4W.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9KMS0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKSSYVVLCA TFAAASFTSS VQAEAILHAF NWKYADVTAN AAQIAAAGYK
60 70 80 90 100
KVLISPALKS SGNEWWARYQ PQDLRVIDSP LGNKTDLQTL IKTLQDYGVE
110 120 130 140 150
VYSDVVFNHM ANESWKRSDL NYPGSEVLAS YTNQAYYYQQ QKLFGDLSHN
160 170 180 190 200
LFSQNDFHPE GCITDWGNPG HVQYWRLCGG AGDRGLPDLD ANAWVINQQR
210 220 230 240 250
AYLQALKQMG IRGFRIDAVK HMSQYHIDQV FTPEIISGMH VFGEVITSGG
260 270 280 290 300
QGDGSYDAFL APYLNNTTHA AYDFPLFASI RAAFSYQGSM SQLHDPQAYG
310 320 330 340 350
QALPNARAIT FAITHDIPTN DGFRYQILNP QDEQLAYAYL LGKDGGTPLI
360 370 380 390 400
YSDDLADHED KDNGRWANVW NQPSMQHMLR FHNAMQGKPM TVMYSDSCLM
410 420 430 440 450
LFKRGKEGVV GINKCGESKN VTIDTYQHEF NWYQTYQDTL SDDRFSVSSR
460
YHTLTIPARV ARMWML
Length:466
Mass (Da):52,573
Last modified:October 1, 2000 - v1
Checksum:i7CABB77330C05D3F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE003853 Genomic DNA. Translation: AAF96161.1.
PIRiB82482.
RefSeqiNP_232648.1. NC_002506.1.

Genome annotation databases

GeneIDi2612181.
KEGGivch:VCA0250.
PATRICi20085063. VBIVibCho83274_2883.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE003853 Genomic DNA. Translation: AAF96161.1 .
PIRi B82482.
RefSeqi NP_232648.1. NC_002506.1.

3D structure databases

ProteinModelPortali Q9KMS0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 243277.VCA0250.

Protein family/group databases

CAZyi GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

DNASUi 2612181.
Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 2612181.
KEGGi vch:VCA0250.
PATRICi 20085063. VBIVibCho83274_2883.

Phylogenomic databases

KOi K01176.
OMAi DLDPNNW.
OrthoDBi EOG6K6V4W.

Enzyme and pathway databases

BioCyci VCHO:VCA0250-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 39315 / El Tor Inaba N16961Imported.

Entry informationi

Entry nameiQ9KMS0_VIBCH
AccessioniPrimary (citable) accession number: Q9KMS0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: October 1, 2014
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3