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Protein

Uncharacterized response regulatory protein VC_A0850

Gene

VC_A0850

Organism
Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  • DNA binding Source: UniProtKB-KW
  • phosphorelay response regulator activity Source: TIGR

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation, Two-component regulatory system

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciVCHO:VCA0850-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized response regulatory protein VC_A0850
Gene namesi
Ordered Locus Names:VC_A0850
OrganismiVibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Taxonomic identifieri243277 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
Proteomesi
  • UP000000584 Componenti: Chromosome 2

Subcellular locationi

GO - Cellular componenti

  • intracellular Source: GOC
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 261261Uncharacterized response regulatory protein VC_A0850PRO_0000081373Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei54 – 5414-aspartylphosphatePROSITE-ProRule annotation

Keywords - PTMi

Phosphoprotein

Interactioni

Protein-protein interaction databases

STRINGi243277.VCA0850.

Structurei

3D structure databases

ProteinModelPortaliQ9KL96.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini7 – 122116Response regulatoryPROSITE-ProRule annotationAdd
BLAST
Domaini157 – 261105HTH LytTR-typePROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 HTH LytTR-type DNA-binding domain.PROSITE-ProRule annotation
Contains 1 response regulatory domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG4108VAC. Bacteria.
COG3279. LUCA.
OMAiYLIRTPL.
OrthoDBiEOG6G4VQG.

Family and domain databases

InterProiIPR011006. CheY-like_superfamily.
IPR007492. LytTR_DNA-bd_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF04397. LytTR. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
SMARTiSM00850. LytTR. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
PROSITEiPS50930. HTH_LYTTR. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9KL96-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMNQTYTAVL ADDEPLLRHH LNKLLAELWP ALEIVASAEN GQIALQAIEQ
60 70 80 90 100
HQPDVVFLDI RMPKMDGIEV ARRLLQQPKV PLVVFITAYD EYAVSAFETH
110 120 130 140 150
AIDYLLKPLS SSRLASCCEK LQQQLRRNVA PSNDLAQLMS QFEQLTRTVK
160 170 180 190 200
PQYQVWLKAS KGEEIHLIAV NELLYVKAED KYLSLYKVHG ATTHEYLLRS
210 220 230 240 250
SLKELLAQLD PNQFWQIHRS IVVNVGKIDK VTRDFGGKMW VHIDRLQLPV
260
SRALQHLFKV S
Length:261
Mass (Da):29,945
Last modified:October 1, 2000 - v1
Checksum:iC70C47F39499F196
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE003853 Genomic DNA. Translation: AAF96748.1.
PIRiH82407.
RefSeqiNP_233236.1. NC_002506.1.
WP_000981879.1. NC_002506.1.

Genome annotation databases

EnsemblBacteriaiAAF96748; AAF96748; VC_A0850.
GeneIDi2612400.
KEGGivch:VCA0850.
PATRICi20086238. VBIVibCho83274_3466.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE003853 Genomic DNA. Translation: AAF96748.1.
PIRiH82407.
RefSeqiNP_233236.1. NC_002506.1.
WP_000981879.1. NC_002506.1.

3D structure databases

ProteinModelPortaliQ9KL96.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243277.VCA0850.

Protocols and materials databases

DNASUi2612400.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAF96748; AAF96748; VC_A0850.
GeneIDi2612400.
KEGGivch:VCA0850.
PATRICi20086238. VBIVibCho83274_3466.

Phylogenomic databases

eggNOGiENOG4108VAC. Bacteria.
COG3279. LUCA.
OMAiYLIRTPL.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciVCHO:VCA0850-MONOMER.

Family and domain databases

InterProiIPR011006. CheY-like_superfamily.
IPR007492. LytTR_DNA-bd_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF04397. LytTR. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
SMARTiSM00850. LytTR. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
PROSITEiPS50930. HTH_LYTTR. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 39315 / El Tor Inaba N16961.

Entry informationi

Entry nameiY0G0_VIBCH
AccessioniPrimary (citable) accession number: Q9KL96
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 23, 2003
Last sequence update: October 1, 2000
Last modified: November 11, 2015
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.