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Q9KJC4 (ARPR_PSEPU) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable HTH-type transcriptional regulator ArpR
Alternative name(s):
Antibiotic efflux pump ArpABC operon regulator
Gene names
Name:arpR
OrganismPseudomonas putida (Arthrobacter siderocapsulatus)
Taxonomic identifier303 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length210 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Probable regulatory protein for the antibiotic efflux pump arpABC operon. May function as a repressor By similarity.

Sequence similarities

Contains 1 HTH tetR-type DNA-binding domain.

Ontologies

Keywords
   Biological processTranscription
Transcription regulation
   LigandDNA-binding
   Molecular functionRepressor
Gene Ontology (GO)
   Biological_processregulation of transcription, DNA-templated

Inferred from electronic annotation. Source: UniProtKB-KW

transcription, DNA-templated

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 210210Probable HTH-type transcriptional regulator ArpR
PRO_0000070624

Regions

Domain10 – 7061HTH tetR-type
DNA binding33 – 5220H-T-H motif Potential

Sequences

Sequence LengthMass (Da)Tools
Q9KJC4 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: A167F57269CC2F91

FASTA21023,797
        10         20         30         40         50         60 
MVRRTKEEAQ ETRAQIIEAA ERAFYKRGVA RTTLADIAEL AGVTRGAIYW HFNNKAELVQ 

        70         80         90        100        110        120 
ALLDSLHETH DHLARASESE DELDPLGCMR KLLLQVFNEL VLDARTRRIN EILHHKCEFT 

       130        140        150        160        170        180 
DDMCEIRQQR QSAVLDCHKG ITLALANAVR RGQLPGELDV ERAAVAMFAY VDGLIGRWLL 

       190        200        210 
LPDSVDLLGD VEKWVDTGLD MLRLSPALRK 

« Hide

References

[1]"Identification and molecular characterization of an efflux system involved in Pseudomonas putida S12 multidrug resistance."
Kieboom J., de Bont J.A.M.
Microbiology 147:43-51(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: ATCC 700801 / S12.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF183959 Genomic DNA. Translation: AAF73830.1.

3D structure databases

ProteinModelPortalQ9KJC4.
SMRQ9KJC4. Positions 5-210.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D1.10.10.60. 2 hits.
1.10.357.10. 1 hit.
InterProIPR023772. DNA-bd_HTH_TetR-type_CS.
IPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
IPR013572. Tscrpt_reg_MAATS_C.
[Graphical view]
PfamPF08361. TetR_C_2. 1 hit.
PF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSPR00455. HTHTETR.
SUPFAMSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEPS01081. HTH_TETR_1. 1 hit.
PS50977. HTH_TETR_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameARPR_PSEPU
AccessionPrimary (citable) accession number: Q9KJC4
Entry history
Integrated into UniProtKB/Swiss-Prot: July 19, 2005
Last sequence update: October 1, 2000
Last modified: February 19, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families