Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q9KFR4

- Q9KFR4_BACHD

UniProt

Q9KFR4 - Q9KFR4_BACHD

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

Alpha-amylase G-6

Gene

BH0413

Organism
Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei882 – 8821GlucoseImported
Binding sitei890 – 8901GlucoseImported
Binding sitei949 – 9491GlucoseImported

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro
  3. starch binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciBHAL272558:GJC5-450-MONOMER.

Protein family/group databases

CAZyiCBM25. Carbohydrate-Binding Module Family 25.
CBM26. Carbohydrate-Binding Module Family 26.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylase G-6Imported
Gene namesi
Ordered Locus Names:BH0413Imported
OrganismiBacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)Imported
Taxonomic identifieri272558 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001258: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi272558.BH0413.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2C3GX-ray2.00A771-863[»]
2C3HX-ray2.24A/B/C/D/E/F/G/H771-863[»]
2C3VX-ray1.39A/B863-958[»]
2C3WX-ray1.81A/B/C/D863-958[»]
2C3XX-ray2.70A/B863-958[»]
ProteinModelPortaliQ9KFR4.
SMRiQ9KFR4. Positions 771-862, 864-958.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9KFR4.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni872 – 8765Glucose bindingImported
Regioni930 – 9378Glucose bindingImported

Phylogenomic databases

KOiK01176.
OMAiTELTHSV.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di3.20.20.80. 2 hits.
InterProiIPR005085. CBM_fam25.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF03423. CBM_25. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
SM01066. CBM_25. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

Q9KFR4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNASYVKKVS LYLLLSFVIT LPLFSPTFSI NSVDASQGGE QQSFSWDNAT
60 70 80 90 100
VYFAITDRFH DGNPSNNQSY GRPQEDAWGQ NIGTFHGGDL QGLTDKLNEG
110 120 130 140 150
YFTELGINAI WITAPYEQVH GWVGGGSDGD FAHYAYHGYY ALDYTMIDQN
160 170 180 190 200
MGTVEDMREF VHTAHEQGIR VVLDVVMNHP GYNTIKDMHE YGFGNPGVSE
210 220 230 240 250
HWTPGQGQNW HDVHQQINYE DAGAWRHWWG PWIRAGIAGY ESCGNSEITM
260 270 280 290 300
CLAGLPDFRT ELTHSVGLPP LLETKWNQER QGGYEDWIVP AANDLRRDLG
310 320 330 340 350
VAPADYIVKW LSAWVEEFGI DGFRVDTAKH VELSRWQQLK DAANEALWKW
360 370 380 390 400
REENPEAPGA NWTDDFWMVG EVWGHGVGRS EYFDHGFDSV INFTFQGEHG
410 420 430 440 450
NGPAYRLDTM ESTFSRYANA INTDSTFNVL SYLSQHDTQL YPRERLIDGG
460 470 480 490 500
TYLMLLPGGV QVFYGDETAR PFGPTGSDPH QGTRSSMNWD SVNEEVLHHW
510 520 530 540 550
QKMGQFRSNH LAVGAGEHRQ IAASPYTFSR TYVEGDVDDR VVVVVGASGE
560 570 580 590 600
TTIDVSSVFS DGQQVRDFYT GNVTVVENGH VTFPAHRNGV ILIERAGDLL
610 620 630 640 650
PSVSASPAGG EFDREQQEVI LYVQHAEWGA YTIDGSDPKE EGTAFANGDV
660 670 680 690 700
ITVGRELNID ESLTLRLYAE NETGEAKAEF TFTKVPAYPQ VFADPPGGTF
710 720 730 740 750
AGDTLKVTLH TRNVEGGTYS IDGSDEQAFT DGDEIMIGKG IEAGSETTLQ
760 770 780 790 800
LKAENEFGTI EETYTYTKST GLTIYFKKPD SWGTPHLYYY DTNPKVDEPT
810 820 830 840 850
WSEAPEMEHY EGDWYTHTIE GVESVRLLFK DRGTNQWPGP GEPGFFRDQD
860 870 880 890 900
GWFDGEWHVD RPGDATDITI YYKTGWTHPH IHYSLNQGAW TTLPGVPLTK
910 920 930 940 950
SEYEGYVKVT IEAEEGSQLR AAFNNGSGQW DNNQGRDYDF SSGVHTLADG

RILSGTPK
Length:958
Mass (Da):107,162
Last modified:October 1, 2000 - v1
Checksum:iC366087A167F024E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000004 Genomic DNA. Translation: BAB04132.1.
PIRiE83701.
RefSeqiNP_241279.1. NC_002570.2.
WP_010896591.1. NC_002570.2.

Genome annotation databases

EnsemblBacteriaiBAB04132; BAB04132; BAB04132.
GeneIDi892065.
KEGGibha:BH0413.
PATRICi18937748. VBIBacHal18977_0433.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000004 Genomic DNA. Translation: BAB04132.1 .
PIRi E83701.
RefSeqi NP_241279.1. NC_002570.2.
WP_010896591.1. NC_002570.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
2C3G X-ray 2.00 A 771-863 [» ]
2C3H X-ray 2.24 A/B/C/D/E/F/G/H 771-863 [» ]
2C3V X-ray 1.39 A/B 863-958 [» ]
2C3W X-ray 1.81 A/B/C/D 863-958 [» ]
2C3X X-ray 2.70 A/B 863-958 [» ]
ProteinModelPortali Q9KFR4.
SMRi Q9KFR4. Positions 771-862, 864-958.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 272558.BH0413.

Protein family/group databases

CAZyi CBM25. Carbohydrate-Binding Module Family 25.
CBM26. Carbohydrate-Binding Module Family 26.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAB04132 ; BAB04132 ; BAB04132 .
GeneIDi 892065.
KEGGi bha:BH0413.
PATRICi 18937748. VBIBacHal18977_0433.

Phylogenomic databases

KOi K01176.
OMAi TELTHSV.
OrthoDBi EOG65QWH3.

Enzyme and pathway databases

BioCyci BHAL272558:GJC5-450-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q9KFR4.

Family and domain databases

Gene3Di 3.20.20.80. 2 hits.
InterProi IPR005085. CBM_fam25.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF03423. CBM_25. 1 hit.
[Graphical view ]
SMARTi SM00642. Aamy. 1 hit.
SM01066. CBM_25. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis."
    Takami H., Nakasone K., Takaki Y., Maeno G., Sasaki R., Masui N., Fuji F., Hirama C., Nakamura Y., Ogasawara N., Kuhara S., Horikoshi K.
    Nucleic Acids Res. 28:4317-4331(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125Imported.
  2. "A structural and functional analysis of alpha-glucan recognition by family 25 and 26 carbohydrate-binding modules reveals a conserved mode of starch recognition."
    Boraston A.B., Healey M., Klassen J., Ficko-Blean E., Lammerts van Bueren A., Law V.
    J. Biol. Chem. 281:587-598(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.39 ANGSTROMS) OF 863-958 IN COMPLEX WITH GLUCOSE.

Entry informationi

Entry nameiQ9KFR4_BACHD
AccessioniPrimary (citable) accession number: Q9KFR4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: November 26, 2014
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteomeImported

External Data

Dasty 3