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Protein
Submitted name:

Alpha-amylase G-6

Gene

BH0413

Organism
Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei801GlucoseCombined sources1
Binding sitei836GlucoseCombined sources1
Binding sitei882GlucoseCombined sources1
Binding sitei890GlucoseCombined sources1
Binding sitei949GlucoseCombined sources1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Protein family/group databases

CAZyiCBM25. Carbohydrate-Binding Module Family 25.
CBM26. Carbohydrate-Binding Module Family 26.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylase G-6Imported
Gene namesi
Ordered Locus Names:BH0413Imported
OrganismiBacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)Imported
Taxonomic identifieri272558 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001258 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 35Sequence analysisAdd BLAST35
ChainiPRO_500432965136 – 958Sequence analysisAdd BLAST923

Interactioni

Protein-protein interaction databases

STRINGi272558.BH0413.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2C3GX-ray2.00A771-863[»]
2C3HX-ray2.24A/B/C/D/E/F/G/H771-863[»]
2C3VX-ray1.39A/B863-958[»]
2C3WX-ray1.81A/B/C/D863-958[»]
2C3XX-ray2.70A/B863-958[»]
ProteinModelPortaliQ9KFR4.
SMRiQ9KFR4.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9KFR4.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini53 – 507AamyInterPro annotationAdd BLAST455
Domaini865 – 943CBM_25InterPro annotationAdd BLAST79

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni788 – 790Glucose bindingCombined sources3
Regioni841 – 842Glucose bindingCombined sources2
Regioni872 – 876Glucose bindingCombined sources5
Regioni930 – 937Glucose bindingCombined sources8

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4108IUK. Bacteria.
COG0366. LUCA.
KOiK01176.
OMAiFAHYAYH.
OrthoDBiPOG091H07J7.

Family and domain databases

Gene3Di3.20.20.80. 2 hits.
InterProiIPR005085. CBM25.
IPR031965. CBM26.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 4 hits.
PfamiPF00128. Alpha-amylase. 1 hit.
PF16738. CBM26. 1 hit.
PF03423. CBM_25. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
SM01066. CBM_25. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

Q9KFR4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNASYVKKVS LYLLLSFVIT LPLFSPTFSI NSVDASQGGE QQSFSWDNAT
60 70 80 90 100
VYFAITDRFH DGNPSNNQSY GRPQEDAWGQ NIGTFHGGDL QGLTDKLNEG
110 120 130 140 150
YFTELGINAI WITAPYEQVH GWVGGGSDGD FAHYAYHGYY ALDYTMIDQN
160 170 180 190 200
MGTVEDMREF VHTAHEQGIR VVLDVVMNHP GYNTIKDMHE YGFGNPGVSE
210 220 230 240 250
HWTPGQGQNW HDVHQQINYE DAGAWRHWWG PWIRAGIAGY ESCGNSEITM
260 270 280 290 300
CLAGLPDFRT ELTHSVGLPP LLETKWNQER QGGYEDWIVP AANDLRRDLG
310 320 330 340 350
VAPADYIVKW LSAWVEEFGI DGFRVDTAKH VELSRWQQLK DAANEALWKW
360 370 380 390 400
REENPEAPGA NWTDDFWMVG EVWGHGVGRS EYFDHGFDSV INFTFQGEHG
410 420 430 440 450
NGPAYRLDTM ESTFSRYANA INTDSTFNVL SYLSQHDTQL YPRERLIDGG
460 470 480 490 500
TYLMLLPGGV QVFYGDETAR PFGPTGSDPH QGTRSSMNWD SVNEEVLHHW
510 520 530 540 550
QKMGQFRSNH LAVGAGEHRQ IAASPYTFSR TYVEGDVDDR VVVVVGASGE
560 570 580 590 600
TTIDVSSVFS DGQQVRDFYT GNVTVVENGH VTFPAHRNGV ILIERAGDLL
610 620 630 640 650
PSVSASPAGG EFDREQQEVI LYVQHAEWGA YTIDGSDPKE EGTAFANGDV
660 670 680 690 700
ITVGRELNID ESLTLRLYAE NETGEAKAEF TFTKVPAYPQ VFADPPGGTF
710 720 730 740 750
AGDTLKVTLH TRNVEGGTYS IDGSDEQAFT DGDEIMIGKG IEAGSETTLQ
760 770 780 790 800
LKAENEFGTI EETYTYTKST GLTIYFKKPD SWGTPHLYYY DTNPKVDEPT
810 820 830 840 850
WSEAPEMEHY EGDWYTHTIE GVESVRLLFK DRGTNQWPGP GEPGFFRDQD
860 870 880 890 900
GWFDGEWHVD RPGDATDITI YYKTGWTHPH IHYSLNQGAW TTLPGVPLTK
910 920 930 940 950
SEYEGYVKVT IEAEEGSQLR AAFNNGSGQW DNNQGRDYDF SSGVHTLADG

RILSGTPK
Length:958
Mass (Da):107,162
Last modified:October 1, 2000 - v1
Checksum:iC366087A167F024E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000004 Genomic DNA. Translation: BAB04132.1.
PIRiE83701.
RefSeqiWP_010896591.1. NC_002570.2.

Genome annotation databases

EnsemblBacteriaiBAB04132; BAB04132; BAB04132.
KEGGibha:BH0413.
PATRICi18937748. VBIBacHal18977_0433.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000004 Genomic DNA. Translation: BAB04132.1.
PIRiE83701.
RefSeqiWP_010896591.1. NC_002570.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2C3GX-ray2.00A771-863[»]
2C3HX-ray2.24A/B/C/D/E/F/G/H771-863[»]
2C3VX-ray1.39A/B863-958[»]
2C3WX-ray1.81A/B/C/D863-958[»]
2C3XX-ray2.70A/B863-958[»]
ProteinModelPortaliQ9KFR4.
SMRiQ9KFR4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272558.BH0413.

Protein family/group databases

CAZyiCBM25. Carbohydrate-Binding Module Family 25.
CBM26. Carbohydrate-Binding Module Family 26.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB04132; BAB04132; BAB04132.
KEGGibha:BH0413.
PATRICi18937748. VBIBacHal18977_0433.

Phylogenomic databases

eggNOGiENOG4108IUK. Bacteria.
COG0366. LUCA.
KOiK01176.
OMAiFAHYAYH.
OrthoDBiPOG091H07J7.

Miscellaneous databases

EvolutionaryTraceiQ9KFR4.

Family and domain databases

Gene3Di3.20.20.80. 2 hits.
InterProiIPR005085. CBM25.
IPR031965. CBM26.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 4 hits.
PfamiPF00128. Alpha-amylase. 1 hit.
PF16738. CBM26. 1 hit.
PF03423. CBM_25. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
SM01066. CBM_25. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiQ9KFR4_BACHD
AccessioniPrimary (citable) accession number: Q9KFR4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: November 2, 2016
This is version 109 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.