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Q9KFR4

- Q9KFR4_BACHD

UniProt

Q9KFR4 - Q9KFR4_BACHD

Protein
Submitted name:

Alpha-amylase G-6

Gene

BH0413

Organism
Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 90 (01 Oct 2014)
      Sequence version 1 (01 Oct 2000)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei784 – 7841Sulfate 2; via amide nitrogen
    Binding sitei801 – 8011Glucose
    Binding sitei814 – 8141Sulfate 1
    Binding sitei836 – 8361Glucose
    Binding sitei882 – 8821GlucoseImported
    Binding sitei890 – 8901GlucoseImported
    Binding sitei949 – 9491GlucoseImported

    GO - Molecular functioni

    1. catalytic activity Source: InterPro
    2. metal ion binding Source: UniProtKB-KW
    3. starch binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciBHAL272558:GJC5-450-MONOMER.

    Protein family/group databases

    CAZyiCBM25. Carbohydrate-Binding Module Family 25.
    CBM26. Carbohydrate-Binding Module Family 26.
    GH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha-amylase G-6Imported
    Gene namesi
    Ordered Locus Names:BH0413Imported
    OrganismiBacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)Imported
    Taxonomic identifieri272558 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
    ProteomesiUP000001258: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi272558.BH0413.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2C3GX-ray2.00A771-863[»]
    2C3HX-ray2.24A/B/C/D/E/F/G/H771-863[»]
    2C3VX-ray1.39A/B863-958[»]
    2C3WX-ray1.81A/B/C/D863-958[»]
    2C3XX-ray2.70A/B863-958[»]
    ProteinModelPortaliQ9KFR4.
    SMRiQ9KFR4. Positions 771-862, 864-958.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ9KFR4.

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni788 – 7903Glucose binding
    Regioni841 – 8422Glucose binding
    Regioni858 – 8603Sulfate 3 binding
    Regioni872 – 8765Glucose bindingImported
    Regioni930 – 9378Glucose bindingImported

    Phylogenomic databases

    KOiK01176.
    OMAiTELTHSV.
    OrthoDBiEOG65QWH3.

    Family and domain databases

    Gene3Di3.20.20.80. 2 hits.
    InterProiIPR005085. CBM_fam25.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF03423. CBM_25. 1 hit.
    [Graphical view]
    SMARTiSM00642. Aamy. 1 hit.
    SM01066. CBM_25. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    Q9KFR4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNASYVKKVS LYLLLSFVIT LPLFSPTFSI NSVDASQGGE QQSFSWDNAT    50
    VYFAITDRFH DGNPSNNQSY GRPQEDAWGQ NIGTFHGGDL QGLTDKLNEG 100
    YFTELGINAI WITAPYEQVH GWVGGGSDGD FAHYAYHGYY ALDYTMIDQN 150
    MGTVEDMREF VHTAHEQGIR VVLDVVMNHP GYNTIKDMHE YGFGNPGVSE 200
    HWTPGQGQNW HDVHQQINYE DAGAWRHWWG PWIRAGIAGY ESCGNSEITM 250
    CLAGLPDFRT ELTHSVGLPP LLETKWNQER QGGYEDWIVP AANDLRRDLG 300
    VAPADYIVKW LSAWVEEFGI DGFRVDTAKH VELSRWQQLK DAANEALWKW 350
    REENPEAPGA NWTDDFWMVG EVWGHGVGRS EYFDHGFDSV INFTFQGEHG 400
    NGPAYRLDTM ESTFSRYANA INTDSTFNVL SYLSQHDTQL YPRERLIDGG 450
    TYLMLLPGGV QVFYGDETAR PFGPTGSDPH QGTRSSMNWD SVNEEVLHHW 500
    QKMGQFRSNH LAVGAGEHRQ IAASPYTFSR TYVEGDVDDR VVVVVGASGE 550
    TTIDVSSVFS DGQQVRDFYT GNVTVVENGH VTFPAHRNGV ILIERAGDLL 600
    PSVSASPAGG EFDREQQEVI LYVQHAEWGA YTIDGSDPKE EGTAFANGDV 650
    ITVGRELNID ESLTLRLYAE NETGEAKAEF TFTKVPAYPQ VFADPPGGTF 700
    AGDTLKVTLH TRNVEGGTYS IDGSDEQAFT DGDEIMIGKG IEAGSETTLQ 750
    LKAENEFGTI EETYTYTKST GLTIYFKKPD SWGTPHLYYY DTNPKVDEPT 800
    WSEAPEMEHY EGDWYTHTIE GVESVRLLFK DRGTNQWPGP GEPGFFRDQD 850
    GWFDGEWHVD RPGDATDITI YYKTGWTHPH IHYSLNQGAW TTLPGVPLTK 900
    SEYEGYVKVT IEAEEGSQLR AAFNNGSGQW DNNQGRDYDF SSGVHTLADG 950
    RILSGTPK 958
    Length:958
    Mass (Da):107,162
    Last modified:October 1, 2000 - v1
    Checksum:iC366087A167F024E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000004 Genomic DNA. Translation: BAB04132.1.
    PIRiE83701.
    RefSeqiNP_241279.1. NC_002570.2.

    Genome annotation databases

    EnsemblBacteriaiBAB04132; BAB04132; BAB04132.
    GeneIDi892065.
    KEGGibha:BH0413.
    PATRICi18937748. VBIBacHal18977_0433.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000004 Genomic DNA. Translation: BAB04132.1 .
    PIRi E83701.
    RefSeqi NP_241279.1. NC_002570.2.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2C3G X-ray 2.00 A 771-863 [» ]
    2C3H X-ray 2.24 A/B/C/D/E/F/G/H 771-863 [» ]
    2C3V X-ray 1.39 A/B 863-958 [» ]
    2C3W X-ray 1.81 A/B/C/D 863-958 [» ]
    2C3X X-ray 2.70 A/B 863-958 [» ]
    ProteinModelPortali Q9KFR4.
    SMRi Q9KFR4. Positions 771-862, 864-958.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 272558.BH0413.

    Protein family/group databases

    CAZyi CBM25. Carbohydrate-Binding Module Family 25.
    CBM26. Carbohydrate-Binding Module Family 26.
    GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAB04132 ; BAB04132 ; BAB04132 .
    GeneIDi 892065.
    KEGGi bha:BH0413.
    PATRICi 18937748. VBIBacHal18977_0433.

    Phylogenomic databases

    KOi K01176.
    OMAi TELTHSV.
    OrthoDBi EOG65QWH3.

    Enzyme and pathway databases

    BioCyci BHAL272558:GJC5-450-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei Q9KFR4.

    Family and domain databases

    Gene3Di 3.20.20.80. 2 hits.
    InterProi IPR005085. CBM_fam25.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF03423. CBM_25. 1 hit.
    [Graphical view ]
    SMARTi SM00642. Aamy. 1 hit.
    SM01066. CBM_25. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis."
      Takami H., Nakasone K., Takaki Y., Maeno G., Sasaki R., Masui N., Fuji F., Hirama C., Nakamura Y., Ogasawara N., Kuhara S., Horikoshi K.
      Nucleic Acids Res. 28:4317-4331(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125Imported.
    2. "A structural and functional analysis of alpha-glucan recognition by family 25 and 26 carbohydrate-binding modules reveals a conserved mode of starch recognition."
      Boraston A.B., Healey M., Klassen J., Ficko-Blean E., Lammerts van Bueren A., Law V.
      J. Biol. Chem. 281:587-598(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (1.39 ANGSTROMS) OF 863-958 IN COMPLEX WITH GLUCOSE.

    Entry informationi

    Entry nameiQ9KFR4_BACHD
    AccessioniPrimary (citable) accession number: Q9KFR4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 1, 2000
    Last sequence update: October 1, 2000
    Last modified: October 1, 2014
    This is version 90 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3