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Unreviewed, UniProtKB/TrEMBL Q9KEF3 (Q9KEF3_BACHD)

Last modified May 5, 2009. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesRecommended name:
    Endo-1,4-beta-xylanase RuleBase RU004392V0
    EC=3.2.1.8
Gene names
Name: xyn11A EMBL AAO12276.1
Ordered Locus Names: BH0899
OrganismBacillus halodurans [Complete proteome] [HAMAP]
Taxonomic identifier86665 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacillalesBacillaceaeBacillus

Protein attributes

Sequence length210 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans. RuleBase RU004392V0

Pathway

Glycan degradation; xylan degradation. RuleBase RU004392V0

Sequence similarities

Belongs to the glycosyl hydrolase 11 (cellulase G) family. RuleBase RU003433V0

Ontologies

Keywords
   Biological processXylan degradation RuleBase RU003433V0
   Molecular functionGlycosidase RuleBase RU003433V0
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionendo-1,4-beta-xylanase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9KEF3-1 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: AC4BA5DD5D67A1B2

FASTA21023,313
        10         20         30         40         50         60 
MFKFVTKVLT VVIAATISFC LSAVPASANT YWQYWTDGGG TVNATNGPGG NYSVTWRDTG 

        70         80         90        100        110        120 
NFVVGKGWEI GSPNRTIHYN AGVWEPSGNG YLTLYGWTRN QLIEYYVVDN WGTYRPTGTH 

       130        140        150        160        170        180 
RGTVVSDGGT YDIYTTMRYN APSIDGTQTF QQFWSVRQSK RPTGNNVSIT FSNHVNAWRN 

       190        200        210 
AGMNLGSSWS YQVLATEGYQ SSGRSNVTVW 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis."
Takami H., Nakasone K., Takaki Y., Maeno G., Sasaki R., Masui N., Fuji F., Hirama C., Nakamura Y., Ogasawara N., Kuhara S., Horikoshi K.
Nucleic Acids Res. 28:4317-4331(2000) [PubMed: 11058132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-125 / C-125 / DSM 18197 / FERM 7344 / JCM 9153.
[2]"Revision of the taxonomic position of the xylanolytic Bacillus sp. MIR32 reidentified as Bacillus halodurans and plasmid-mediated transformation of B. halodurans."
Martinez M.A., Delgado O.D., Breccia J.D., Baigori M.D., Sineriz F.
Extremophiles 6:391-395(2002) [PubMed: 12382115] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: MIR32 EMBL AAO12276.1.
[3]"Complete CDS encoding Xyn11A from B. halodurans MIR32, an endo-beta-1,4 xylanohydrolase belonging to the group 11 of glycosil-hydrolases."
Martinez M.A., Delgado O.D., Breccia J.D., Sineriz F.
Submitted (OCT-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: MIR32 EMBL AAO12276.1.

Cross-references

Sequence databases

AY170624 Genomic DNA. Translation: AAO12276.1.
BA000004 Genomic DNA. Translation: BAB04618.1.
PIRC83762.
RefSeqNP_241765.1.

3D structure databases

HSSPHSSP built from PDB template 1XNB based on UniProtKB P09850.
SMRQ9KEF3. Positions 27-210.
ModBaseSearch...

Protein family/group databases

CAZyGH11. Glycoside Hydrolase Family 11.

Genome annotation databases

GeneID893828.
GenomeReviewsGene locus BH0899 in contig BA000004_GR.
KEGGbha:BH0899.
NMPDRfig|272558.1.peg.899.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ9KEF3.
OMAQ9KEF3. IEYYVVD.

Enzyme and pathway databases

BioCycBHAL272558:BH0899-MON.

Family and domain databases

InterProIPR001137. Glyco_hydro_11.
IPR013319. Glyco_hydro_11/12_cat.
IPR018208. Glyco_hydro_11_AS.
[Graphical view]
Gene3DG3DSA:2.60.120.180. Glyco_hydro_11/12_cat. 1 hit.
PfamPF00457. Glyco_hydro_11. 1 hit.
[Graphical view]
PRINTSPR00911. GLHYDRLASE11.
PROSITEPS00777. GLYCOSYL_HYDROL_F11_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9KEF3_BACHD
AccessionPrimary (citable) accession number: Q9KEF3
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: May 5, 2009
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information