Unreviewed,
UniProtKB/TrEMBL Q9KEF3 (Q9KEF3_BACHD)
Last modified
May 5, 2009.
Version 56.
History...
Clusters with 100%,
90%,
50% identity |
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information
Names and origin
| Protein names | Recommended name: Endo-1,4-beta-xylanase RuleBase RU004392V0 EC=3.2.1.8 | ||||
| Gene names |
| ||||
| Organism | Bacillus halodurans [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 86665 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus |
Protein attributes
| Sequence length | 210 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Catalytic activity | Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans. RuleBase RU004392V0 |
| Pathway | |
| Sequence similarities | Belongs to the glycosyl hydrolase 11 (cellulase G) family. RuleBase RU003433V0 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Xylan degradation RuleBase RU003433V0 |
| Molecular function | Glycosidase RuleBase RU003433V0 Hydrolase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular function | endo-1,4-beta-xylanase activity Inferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis." Takami H., Nakasone K., Takaki Y., Maeno G., Sasaki R., Masui N., Fuji F., Hirama C., Nakamura Y., Ogasawara N., Kuhara S., Horikoshi K. Nucleic Acids Res. 28:4317-4331(2000) [PubMed: 11058132] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-125 / C-125 / DSM 18197 / FERM 7344 / JCM 9153. |
| [2] | "Revision of the taxonomic position of the xylanolytic Bacillus sp. MIR32 reidentified as Bacillus halodurans and plasmid-mediated transformation of B. halodurans." Martinez M.A., Delgado O.D., Breccia J.D., Baigori M.D., Sineriz F. Extremophiles 6:391-395(2002) [PubMed: 12382115] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: MIR32 EMBL AAO12276.1. |
| [3] | "Complete CDS encoding Xyn11A from B. halodurans MIR32, an endo-beta-1,4 xylanohydrolase belonging to the group 11 of glycosil-hydrolases." Martinez M.A., Delgado O.D., Breccia J.D., Sineriz F. Submitted (OCT-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: MIR32 EMBL AAO12276.1. |
Cross-references
Sequence databases | |
|---|---|
| AY170624 Genomic DNA. Translation: AAO12276.1. BA000004 Genomic DNA. Translation: BAB04618.1. | |
| PIR | C83762. |
| RefSeq | NP_241765.1. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1XNB based on UniProtKB P09850. |
| SMR | Q9KEF3. Positions 27-210. |
| ModBase | Search... |
Protein family/group databases | |
| CAZy | GH11. Glycoside Hydrolase Family 11. |
Genome annotation databases | |
| GeneID | 893828. |
| GenomeReviews | Gene locus BH0899 in contig BA000004_GR. |
| KEGG | bha:BH0899. |
| NMPDR | fig|272558.1.peg.899. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | Q9KEF3. |
| OMA | Q9KEF3. IEYYVVD. |
Enzyme and pathway databases | |
| BioCyc | BHAL272558:BH0899-MON. |
Family and domain databases | |
| InterPro | IPR001137. Glyco_hydro_11. IPR013319. Glyco_hydro_11/12_cat. IPR018208. Glyco_hydro_11_AS. [Graphical view] |
| Gene3D | G3DSA:2.60.120.180. Glyco_hydro_11/12_cat. 1 hit. |
| Pfam | PF00457. Glyco_hydro_11. 1 hit. [Graphical view] |
| PRINTS | PR00911. GLHYDRLASE11. |
| PROSITE | PS00777. GLYCOSYL_HYDROL_F11_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q9KEF3_BACHD | ||||||||
| Accession | Primary (citable) accession number: Q9KEF3 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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