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Protein

30S ribosomal protein S21

Gene

rpsU

Organism
Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciBHAL272558:GJC5-1433-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S21
Gene namesi
Name:rpsU
Ordered Locus Names:BH1354
OrganismiBacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Taxonomic identifieri272558 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001258 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 575730S ribosomal protein S21PRO_0000178297Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi272558.BH1354.

Structurei

3D structure databases

ProteinModelPortaliQ9KD65.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S21P family.Curated

Phylogenomic databases

eggNOGiENOG4105VCC. Bacteria.
COG0828. LUCA.
HOGENOMiHOG000157460.
KOiK02970.
OMAiDIKRRRH.
OrthoDBiEOG6FBX3Z.

Family and domain databases

HAMAPiMF_00358. Ribosomal_S21.
InterProiIPR001911. Ribosomal_S21.
IPR018278. Ribosomal_S21_CS.
[Graphical view]
PfamiPF01165. Ribosomal_S21. 1 hit.
[Graphical view]
PRINTSiPR00976. RIBOSOMALS21.
ProDomiPD005521. Ribosomal_S21. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR00030. S21p. 1 hit.
PROSITEiPS01181. RIBOSOMAL_S21. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9KD65-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAETRVRKNE SIDAALRRFK RSLSKEGTLA EVRKRKHYEK PSVRRKKKSE

AARKRKF
Length:57
Mass (Da):6,844
Last modified:October 1, 2000 - v1
Checksum:i2E4C1E132732111E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000004 Genomic DNA. Translation: BAB05073.1.
PIRiB83819.
RefSeqiWP_010897519.1. NC_002570.2.

Genome annotation databases

EnsemblBacteriaiBAB05073; BAB05073; BAB05073.
KEGGibha:BH1354.
PATRICi18939774. VBIBacHal18977_1405.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000004 Genomic DNA. Translation: BAB05073.1.
PIRiB83819.
RefSeqiWP_010897519.1. NC_002570.2.

3D structure databases

ProteinModelPortaliQ9KD65.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272558.BH1354.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB05073; BAB05073; BAB05073.
KEGGibha:BH1354.
PATRICi18939774. VBIBacHal18977_1405.

Phylogenomic databases

eggNOGiENOG4105VCC. Bacteria.
COG0828. LUCA.
HOGENOMiHOG000157460.
KOiK02970.
OMAiDIKRRRH.
OrthoDBiEOG6FBX3Z.

Enzyme and pathway databases

BioCyciBHAL272558:GJC5-1433-MONOMER.

Family and domain databases

HAMAPiMF_00358. Ribosomal_S21.
InterProiIPR001911. Ribosomal_S21.
IPR018278. Ribosomal_S21_CS.
[Graphical view]
PfamiPF01165. Ribosomal_S21. 1 hit.
[Graphical view]
PRINTSiPR00976. RIBOSOMALS21.
ProDomiPD005521. Ribosomal_S21. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR00030. S21p. 1 hit.
PROSITEiPS01181. RIBOSOMAL_S21. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis."
    Takami H., Nakasone K., Takaki Y., Maeno G., Sasaki R., Masui N., Fuji F., Hirama C., Nakamura Y., Ogasawara N., Kuhara S., Horikoshi K.
    Nucleic Acids Res. 28:4317-4331(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125.

Entry informationi

Entry nameiRS21_BACHD
AccessioniPrimary (citable) accession number: Q9KD65
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 4, 2001
Last sequence update: October 1, 2000
Last modified: January 20, 2016
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.