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Q9KCL9

- RHAA_BACHD

UniProt

Q9KCL9 - RHAA_BACHD

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Protein
L-rhamnose isomerase
Gene
rhaA, BH1552
Organism
Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Catalytic activityi

L-rhamnopyranose = L-rhamnulose.UniRule annotation

Cofactori

Binds 1 manganese ion per subunit By similarity.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi261 – 2611Manganese By similarity
Metal bindingi293 – 2931Manganese By similarity
Metal bindingi295 – 2951Manganese By similarity

GO - Molecular functioni

  1. L-rhamnose isomerase activity Source: UniProtKB-HAMAP
  2. manganese ion binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. rhamnose catabolic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Isomerase

Keywords - Biological processi

Rhamnose metabolism

Keywords - Ligandi

Manganese, Metal-binding

Enzyme and pathway databases

BioCyciBHAL272558:GJC5-1636-MONOMER.
UniPathwayiUPA00541; UER00601.

Names & Taxonomyi

Protein namesi
Recommended name:
L-rhamnose isomerase (EC:5.3.1.14)
Gene namesi
Name:rhaA
Ordered Locus Names:BH1552
OrganismiBacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Taxonomic identifieri272558 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001258: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 418418L-rhamnose isomeraseUniRule annotation
PRO_0000090549Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi272558.BH1552.

Structurei

Secondary structure

Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi6 – 1510
Turni16 – 183
Helixi21 – 3010
Beta strandi34 – 363
Helixi37 – 393
Turni40 – 434
Helixi70 – 8112
Beta strandi84 – 863
Beta strandi89 – 935
Helixi94 – 963
Beta strandi100 – 1023
Helixi106 – 1083
Helixi111 – 1144
Helixi115 – 12410
Beta strandi127 – 1315
Beta strandi135 – 1373
Helixi138 – 1403
Beta strandi145 – 1473
Helixi151 – 17525
Beta strandi179 – 1835
Beta strandi188 – 1914
Helixi197 – 21014
Turni217 – 2193
Beta strandi220 – 2256
Beta strandi235 – 2395
Helixi241 – 25010
Beta strandi254 – 2585
Helixi268 – 2703
Helixi272 – 2754
Turni276 – 2783
Beta strandi282 – 2865
Beta strandi290 – 2934
Helixi302 – 31312
Turni317 – 3193
Beta strandi320 – 3245
Beta strandi329 – 3313
Helixi333 – 35220
Helixi356 – 3649
Helixi368 – 37710
Helixi378 – 3803
Helixi383 – 39311
Turni399 – 4013
Helixi402 – 41211
Turni413 – 4164

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3P14X-ray2.51A/B/C/D1-418[»]
3UU0X-ray2.70A/B/C/D1-418[»]
3UVAX-ray2.69A/B/C/D1-418[»]
3UXIX-ray2.73A/B/C/D1-418[»]
ProteinModelPortaliQ9KCL9.
SMRiQ9KCL9. Positions 2-417.

Miscellaneous databases

EvolutionaryTraceiQ9KCL9.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG4806.
HOGENOMiHOG000269679.
KOiK01813.
OMAiIPVSMHC.
OrthoDBiEOG6KMB74.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00541. RhaA.
InterProiIPR009308. Rhamnose_isomerase.
IPR013022. Xyl_isomerase-like_TIM-brl.
[Graphical view]
PfamiPF06134. RhaA. 1 hit.
[Graphical view]
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR01748. rhaA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9KCL9-1 [UniParc]FASTAAdd to Basket

« Hide

MSMKSQFERA KIEYGQWGID VEEALERLKQ VPISIHCWQG DDVGGFELSK    50
GELSGGIDVT GDYPGKATTP EELRMDLEKA LSLIPGKHRV NLHAIYAETD 100
GKVVERDQLE PRHFEKWVRW AKRHGLGLDF NPTLFSHEKA KDGLTLAHPD 150
QAIRQFWIDH CIASRKIGEY FGKELETPCL TNIWIPDGYK DTPSDRLTPR 200
KRLKESLDQI FAAEINEAYN LDAVESKLFG IGSESYVVGS HEFYLSYALK 250
NDKLCLLDTG HYHPTETVSN KISAMLLFHD KLALHVSRPV RWDSDHVVTF 300
DDELREIALE IVRNDALDRV LIGLDFFDAS INRIAAWTIG TRNVIKALLF 350
AMLIPHKQLK EWQETGDYTR RLAVLEEFKT YPLGAIWNEY CERMNVPIKE 400
EWLKEIAIYE KEVLLQRH 418
Length:418
Mass (Da):48,178
Last modified:October 1, 2000 - v1
Checksum:i10165258A259864F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000004 Genomic DNA. Translation: BAB05271.1.
PIRiH83843.
RefSeqiNP_242418.1. NC_002570.2.
WP_010897715.1. NC_002570.2.

Genome annotation databases

EnsemblBacteriaiBAB05271; BAB05271; BAB05271.
GeneIDi891271.
KEGGibha:BH1552.
PATRICi18940208. VBIBacHal18977_1617.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000004 Genomic DNA. Translation: BAB05271.1 .
PIRi H83843.
RefSeqi NP_242418.1. NC_002570.2.
WP_010897715.1. NC_002570.2.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3P14 X-ray 2.51 A/B/C/D 1-418 [» ]
3UU0 X-ray 2.70 A/B/C/D 1-418 [» ]
3UVA X-ray 2.69 A/B/C/D 1-418 [» ]
3UXI X-ray 2.73 A/B/C/D 1-418 [» ]
ProteinModelPortali Q9KCL9.
SMRi Q9KCL9. Positions 2-417.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 272558.BH1552.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAB05271 ; BAB05271 ; BAB05271 .
GeneIDi 891271.
KEGGi bha:BH1552.
PATRICi 18940208. VBIBacHal18977_1617.

Phylogenomic databases

eggNOGi COG4806.
HOGENOMi HOG000269679.
KOi K01813.
OMAi IPVSMHC.
OrthoDBi EOG6KMB74.

Enzyme and pathway databases

UniPathwayi UPA00541 ; UER00601 .
BioCyci BHAL272558:GJC5-1636-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q9KCL9.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
HAMAPi MF_00541. RhaA.
InterProi IPR009308. Rhamnose_isomerase.
IPR013022. Xyl_isomerase-like_TIM-brl.
[Graphical view ]
Pfami PF06134. RhaA. 1 hit.
[Graphical view ]
SUPFAMi SSF51658. SSF51658. 1 hit.
TIGRFAMsi TIGR01748. rhaA. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis."
    Takami H., Nakasone K., Takaki Y., Maeno G., Sasaki R., Masui N., Fuji F., Hirama C., Nakamura Y., Ogasawara N., Kuhara S., Horikoshi K.
    Nucleic Acids Res. 28:4317-4331(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125.

Entry informationi

Entry nameiRHAA_BACHD
AccessioniPrimary (citable) accession number: Q9KCL9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 19, 2001
Last sequence update: October 1, 2000
Last modified: September 3, 2014
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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