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Q9KCL9

- RHAA_BACHD

UniProt

Q9KCL9 - RHAA_BACHD

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Protein

L-rhamnose isomerase

Gene

rhaA

Organism
Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

Catalytic activityi

L-rhamnopyranose = L-rhamnulose.UniRule annotation

Cofactori

Mn2+UniRule annotationNote: Binds 1 Mn(2+) ion per subunit.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi261 – 2611ManganeseUniRule annotation
Metal bindingi293 – 2931ManganeseUniRule annotation
Metal bindingi295 – 2951ManganeseUniRule annotation

GO - Molecular functioni

  1. L-rhamnose isomerase activity Source: UniProtKB-HAMAP
  2. manganese ion binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. rhamnose catabolic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Isomerase

Keywords - Biological processi

Rhamnose metabolism

Keywords - Ligandi

Manganese, Metal-binding

Enzyme and pathway databases

BioCyciBHAL272558:GJC5-1636-MONOMER.
UniPathwayiUPA00541; UER00601.

Names & Taxonomyi

Protein namesi
Recommended name:
L-rhamnose isomeraseUniRule annotation (EC:5.3.1.14UniRule annotation)
Gene namesi
Name:rhaAUniRule annotation
Ordered Locus Names:BH1552
OrganismiBacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Taxonomic identifieri272558 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001258: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 418418L-rhamnose isomerasePRO_0000090549Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi272558.BH1552.

Structurei

Secondary structure

1
418
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi6 – 1510Combined sources
Turni16 – 183Combined sources
Helixi21 – 3010Combined sources
Beta strandi34 – 363Combined sources
Helixi37 – 393Combined sources
Turni40 – 434Combined sources
Helixi70 – 8112Combined sources
Beta strandi84 – 863Combined sources
Beta strandi89 – 935Combined sources
Helixi94 – 963Combined sources
Beta strandi100 – 1023Combined sources
Helixi106 – 1083Combined sources
Helixi111 – 1144Combined sources
Helixi115 – 12410Combined sources
Beta strandi127 – 1315Combined sources
Beta strandi135 – 1373Combined sources
Helixi138 – 1403Combined sources
Beta strandi145 – 1473Combined sources
Helixi151 – 17525Combined sources
Beta strandi179 – 1835Combined sources
Beta strandi188 – 1914Combined sources
Helixi197 – 21014Combined sources
Turni217 – 2193Combined sources
Beta strandi220 – 2256Combined sources
Beta strandi235 – 2395Combined sources
Helixi241 – 25010Combined sources
Beta strandi254 – 2585Combined sources
Helixi268 – 2703Combined sources
Helixi272 – 2754Combined sources
Turni276 – 2783Combined sources
Beta strandi282 – 2865Combined sources
Beta strandi290 – 2934Combined sources
Helixi302 – 31312Combined sources
Turni317 – 3193Combined sources
Beta strandi320 – 3245Combined sources
Beta strandi329 – 3313Combined sources
Helixi333 – 35220Combined sources
Helixi356 – 3649Combined sources
Helixi368 – 37710Combined sources
Helixi378 – 3803Combined sources
Helixi383 – 39311Combined sources
Turni399 – 4013Combined sources
Helixi402 – 41211Combined sources
Turni413 – 4164Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3P14X-ray2.51A/B/C/D1-418[»]
3UU0X-ray2.70A/B/C/D1-418[»]
3UVAX-ray2.69A/B/C/D1-418[»]
3UXIX-ray2.73A/B/C/D1-418[»]
ProteinModelPortaliQ9KCL9.
SMRiQ9KCL9. Positions 2-417.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9KCL9.

Family & Domainsi

Sequence similaritiesi

Belongs to the rhamnose isomerase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG4806.
HOGENOMiHOG000269679.
KOiK01813.
OMAiIPVSMHC.
OrthoDBiEOG6KMB74.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00541. RhaA.
InterProiIPR009308. Rhamnose_isomerase.
IPR013022. Xyl_isomerase-like_TIM-brl.
[Graphical view]
PfamiPF06134. RhaA. 1 hit.
[Graphical view]
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR01748. rhaA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9KCL9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSMKSQFERA KIEYGQWGID VEEALERLKQ VPISIHCWQG DDVGGFELSK
60 70 80 90 100
GELSGGIDVT GDYPGKATTP EELRMDLEKA LSLIPGKHRV NLHAIYAETD
110 120 130 140 150
GKVVERDQLE PRHFEKWVRW AKRHGLGLDF NPTLFSHEKA KDGLTLAHPD
160 170 180 190 200
QAIRQFWIDH CIASRKIGEY FGKELETPCL TNIWIPDGYK DTPSDRLTPR
210 220 230 240 250
KRLKESLDQI FAAEINEAYN LDAVESKLFG IGSESYVVGS HEFYLSYALK
260 270 280 290 300
NDKLCLLDTG HYHPTETVSN KISAMLLFHD KLALHVSRPV RWDSDHVVTF
310 320 330 340 350
DDELREIALE IVRNDALDRV LIGLDFFDAS INRIAAWTIG TRNVIKALLF
360 370 380 390 400
AMLIPHKQLK EWQETGDYTR RLAVLEEFKT YPLGAIWNEY CERMNVPIKE
410
EWLKEIAIYE KEVLLQRH
Length:418
Mass (Da):48,178
Last modified:October 1, 2000 - v1
Checksum:i10165258A259864F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000004 Genomic DNA. Translation: BAB05271.1.
PIRiH83843.
RefSeqiNP_242418.1. NC_002570.2.
WP_010897715.1. NC_002570.2.

Genome annotation databases

EnsemblBacteriaiBAB05271; BAB05271; BAB05271.
GeneIDi891271.
KEGGibha:BH1552.
PATRICi18940208. VBIBacHal18977_1617.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000004 Genomic DNA. Translation: BAB05271.1 .
PIRi H83843.
RefSeqi NP_242418.1. NC_002570.2.
WP_010897715.1. NC_002570.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3P14 X-ray 2.51 A/B/C/D 1-418 [» ]
3UU0 X-ray 2.70 A/B/C/D 1-418 [» ]
3UVA X-ray 2.69 A/B/C/D 1-418 [» ]
3UXI X-ray 2.73 A/B/C/D 1-418 [» ]
ProteinModelPortali Q9KCL9.
SMRi Q9KCL9. Positions 2-417.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 272558.BH1552.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAB05271 ; BAB05271 ; BAB05271 .
GeneIDi 891271.
KEGGi bha:BH1552.
PATRICi 18940208. VBIBacHal18977_1617.

Phylogenomic databases

eggNOGi COG4806.
HOGENOMi HOG000269679.
KOi K01813.
OMAi IPVSMHC.
OrthoDBi EOG6KMB74.

Enzyme and pathway databases

UniPathwayi UPA00541 ; UER00601 .
BioCyci BHAL272558:GJC5-1636-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q9KCL9.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
HAMAPi MF_00541. RhaA.
InterProi IPR009308. Rhamnose_isomerase.
IPR013022. Xyl_isomerase-like_TIM-brl.
[Graphical view ]
Pfami PF06134. RhaA. 1 hit.
[Graphical view ]
SUPFAMi SSF51658. SSF51658. 1 hit.
TIGRFAMsi TIGR01748. rhaA. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis."
    Takami H., Nakasone K., Takaki Y., Maeno G., Sasaki R., Masui N., Fuji F., Hirama C., Nakamura Y., Ogasawara N., Kuhara S., Horikoshi K.
    Nucleic Acids Res. 28:4317-4331(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125.

Entry informationi

Entry nameiRHAA_BACHD
AccessioniPrimary (citable) accession number: Q9KCL9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 19, 2001
Last sequence update: October 1, 2000
Last modified: November 26, 2014
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3