Q9KCD6 (Q9KCD6_BACHD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
30S ribosomal protein S1 EMBL BAB05355.1

Gene names

Name:	ypfD EMBL BAB05355.1
Ordered Locus Names:	BH1636

Organism

Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) [Complete proteome] [HAMAP]

Taxonomic identifier

272558 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus › Bacillus halodurans

Protein attributes

Sequence length	383 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein EMBL BAB05355.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: InterPro
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9KCD6 [UniParc]. Last modified October 1, 2000. Version 1. Checksum: A55166107034A03C	FASTA	383	41,678
	10 20 30 40 50 60 MVEEMNNEVT EMKSFSVGDV VSGKVTKVED KQAFVDVGFK VDGIIPISEL SSLHVEKVSD 70 80 90 100 110 120 VLSEGDELEL KVLKVEDDEL ILSKRAVQAE KAWETLQAAL DSGEVIEAEV ADVVKGGLVV 130 140 150 160 170 180 DLGVRGFIPA SLVERHYVED FSDYKGRTLR LKVVELDKEA NKLILSQRAV LDEEVEAKKK 190 200 210 220 230 240 EVLASLQPGD VVEGTVQRLT DFGAFVDVGG VDGLVHISQL AHHRVETPAE VVKEGDAVKV 250 260 270 280 290 300 KVLSVDPDSE RVSLSIKETL PGPWEQVEGT IQPGDVIEGT VKRLVSFGAF VEVAPGVEGL 310 320 330 340 350 360 VHISQIANRH IGTPGEVLSE GERVQAKVLD VNISEKRISL SIRELLDDAG SNQSDREVYE 370 380 STNEESSGFS LGDMIGDELK KYK

References

[1]

"Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis." Takami H., Nakasone K., Takaki Y., Maeno G., Sasaki R., Masui N., Fuji F., Hirama C., Nakamura Y., Ogasawara N., Kuhara S., Horikoshi K. Nucleic Acids Res. 28:4317-4331(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000004 Genomic DNA. Translation: BAB05355.1.
PIR	D83854.
RefSeq	NP_242502.1. NC_002570.2.
3D structure databases
HSSP	HSSP built from PDB template 1SRO based on UniProtKB P05055.
ProteinModelPortal	Q9KCD6.
ModBase	Search...
Protein-protein interaction databases
STRING	272558.BH1636.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAB05355; BAB05355; BAB05355.
GeneID	892532.
KEGG	bha:BH1636.
PATRIC	18940388. VBIBacHal18977_1707.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000044053.
KO	K02945.
OMA	DMMEEIN.
ProtClustDB	PRK06676.
Enzyme and pathway databases
BioCyc	BHAL272558:GJC5-1720-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 4 hits.
InterPro	IPR012340. NA-bd_OB-fold. IPR003029. Rbsml_prot_S1_RNA-bd_dom. IPR000110. Ribosomal_S1. IPR022967. RNA-binding_domain_S1. [Graphical view]
Pfam	PF00575. S1. 4 hits. [Graphical view]
PIRSF	PIRSF002111. RpsA. 1 hit.
PRINTS	PR00681. RIBOSOMALS1.
SMART	SM00316. S1. 4 hits. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 4 hits.
PROSITE	PS50126. S1. 4 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9KCD6_BACHD

Accession

Primary (citable) accession number: Q9KCD6

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2000
Last sequence update:	October 1, 2000
Last modified:	May 1, 2013
This is version 67 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)