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Q9KBR4 (ABFA_BACHD) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alpha-N-arabinofuranosidase
Short name=Arabinosidase
EC=3.2.1.55
Gene names
Name:abfA
Ordered Locus Names:BH1861
OrganismBacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) [Complete proteome] [HAMAP]
Taxonomic identifier272558 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length500 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides.

Sequence similarities

Belongs to the glycosyl hydrolase 51 family.

Ontologies

Keywords
   Molecular functionGlycosidase
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processL-arabinose metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionalpha-N-arabinofuranosidase activity

Inferred from electronic annotation. Source: EC

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 500500Alpha-N-arabinofuranosidase
PRO_0000057699

Sequences

Sequence LengthMass (Da)Tools
Q9KBR4 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: 802337EEA0F225B5

FASTA50056,402
        10         20         30         40         50         60 
MTLTATMVVD KSFKIGEIDK RIYGSFIEHL GRAVYEGIYE PGHPDGDEQG FRKDVIRLVQ 

        70         80         90        100        110        120 
ELQVPLVRYP GGNFVSGYNW EDGVGPVSER PKRLDLAWRT TETNEIGTNE FVDWAKKVGA 

       130        140        150        160        170        180 
EVNMAVNLGS RGVDAARNLV EYCNHPSGSY WSDLRISHGY KDPHNIKTWC LGNEMDGPWQ 

       190        200        210        220        230        240 
IGQKTAEEYG RVAAEAGKVM KLVDPSIELV ACGSSNSKMA TFADWEATVL DHTYDYVDYI 

       250        260        270        280        290        300 
SLHTYYGNRD DDLANYLAQS MDMDEFIRSV IAIADYVKAK KRSKKTIHLS FDEWNVWFHS 

       310        320        330        340        350        360 
NEADRQITPW SVAPPLLEDI YTFEDALLVG SMLITLLKHA DRVKIACLAQ LVNVIAPIMT 

       370        380        390        400        410        420 
EKGGPAWKQT IFYPYMHASV YGRGVALQAQ ISSPKYDSKD FTDVPYLDAA VVHLEEAEEV 

       430        440        450        460        470        480 
TIFAVNKHQT ESLNLQCDMR SFEGYHVLEH IVLEHENMKA TNQGREQVTP HHNGDSAIDQ 

       490        500 
GRLTANLAKL SWNVIRLGKK

« Hide

References

[1]"Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis."
Takami H., Nakasone K., Takaki Y., Maeno G., Sasaki R., Masui N., Fuji F., Hirama C., Nakamura Y., Ogasawara N., Kuhara S., Horikoshi K.
Nucleic Acids Res. 28:4317-4331(2000) [PubMed: 11058132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BA000004 Genomic DNA. Translation: BAB05580.1.
PIRE83882.
RefSeqNP_242727.1. NC_002570.2.

3D structure databases

ProteinModelPortalQ9KBR4.
SMRQ9KBR4. Positions 5-499.
ModBaseSearch...

Protein family/group databases

CAZyGH51. Glycoside Hydrolase Family 51.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBBACT00000053857; EBBACP00000052496; EBBACG00000053848.
GeneID890868.
GenomeReviewsGene locus BH1861 in contig BA000004_GR.
KEGGbha:BH1861.
NMPDRfig|272558.1.peg.1861.
PATRIC18940852. VBIBacHal18977_1939.

Organism-specific databases

CMRSearch...

Phylogenomic databases

GeneTreeEBGT00050000002580.
HOGENOMHBG654651.
OMAWQLGHKS.
ProtClustDBCLSK873151.

Enzyme and pathway databases

BioCycBHAL272558:BH1861-MONOMER.

Family and domain databases

InterProIPR010720. Alpha-L-AF_C.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KOK01209.
PfamPF06964. Alpha-L-AF_C. 1 hit.
[Graphical view]
SMARTSM00813. Alpha-L-AF_C. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameABFA_BACHD
AccessionPrimary (citable) accession number: Q9KBR4
Entry history
Integrated into UniProtKB/Swiss-Prot: July 26, 2002
Last sequence update: October 1, 2000
Last modified: January 25, 2012
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries

SIMILARITY comments

Index of protein domains and families

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