Reviewed,
UniProtKB/Swiss-Prot Q9KBQ4 (ARAD_BACHD)
Last modified
November 3, 2009.
Version 43.
History...
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: L-ribulose-5-phosphate 4-epimerase EC=5.1.3.4 Alternative name(s): Phosphoribulose isomerase | ||||
| Gene names |
| ||||
| Organism | Bacillus halodurans [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 86665 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus |
Protein attributes
| Sequence length | 231 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Catalytic activity | L-ribulose 5-phosphate = D-xylulose 5-phosphate. |
| Cofactor | Binds 1 zinc ion per subunit Potential. |
| Pathway | |
| Sequence similarities | Belongs to the aldolase class II family. AraD/fucA subfamily. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Arabinose catabolism Carbohydrate metabolism |
| Ligand | Metal-binding Zinc |
| Molecular function | Isomerase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | L-arabinose catabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular function | L-ribulose-phosphate 4-epimerase activity Inferred from electronic annotation. Source: EC zinc ion bindingInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
Sequences
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References
| [1] | "Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis." Takami H., Nakasone K., Takaki Y., Maeno G., Sasaki R., Masui N., Fuji F., Hirama C., Nakamura Y., Ogasawara N., Kuhara S., Horikoshi K. Nucleic Acids Res. 28:4317-4331(2000) [PubMed: 11058132] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-125 / C-125 / DSM 18197 / FERM 7344 / JCM 9153. |
Cross-references
Sequence databases | |
|---|---|
| BA000004 Genomic DNA. Translation: BAB05590.1. | |
| PIR | G83883. |
| RefSeq | NP_242737.1. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1JDI based on UniProtKB P08203. |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 891374. |
| GenomeReviews | Gene locus BH1871 in contig BA000004_GR. |
| KEGG | bha:BH1871. |
| NMPDR | fig|272558.1.peg.1871. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | Q9KBQ4. |
| OMA | ISKDRSY. |
Enzyme and pathway databases | |
| BioCyc | BHAL272558:BH1871-MON. |
| BRENDA | 5.1.3.4. 191865. |
Family and domain databases | |
| InterPro | IPR001303. Aldolase_II/adducin_N. IPR004661. AraD. [Graphical view] |
| Gene3D | G3DSA:3.40.225.10. Aldolase_II/adducin_N. 1 hit. |
| Pfam | PF00596. Aldolase_II. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR00760. araD. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | ARAD_BACHD | ||||||||
| Accession | Primary (citable) accession number: Q9KBQ4 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

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