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Q9KBQ3

- ARAB_BACHD

UniProt

Q9KBQ3 - ARAB_BACHD

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Protein

Ribulokinase

Gene

araB

Organism
Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

Catalytic activityi

ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate.UniRule annotation

Pathwayi

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. ribulokinase activity Source: UniProtKB-EC

GO - Biological processi

  1. L-arabinose catabolic process to xylulose 5-phosphate Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Kinase, Transferase

Keywords - Biological processi

Arabinose catabolism, Carbohydrate metabolism

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciBHAL272558:GJC5-1956-MONOMER.
UniPathwayiUPA00145; UER00566.

Names & Taxonomyi

Protein namesi
Recommended name:
RibulokinaseUniRule annotation (EC:2.7.1.16UniRule annotation)
Gene namesi
Name:araBUniRule annotation
Ordered Locus Names:BH1872
OrganismiBacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Taxonomic identifieri272558 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001258: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 563563RibulokinasePRO_0000198354Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi272558.BH1872.

Structurei

Secondary structure

1
563
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi5 – 117
Beta strandi13 – 2210
Turni23 – 253
Beta strandi28 – 358
Beta strandi41 – 455
Helixi61 – 7717
Beta strandi86 – 938
Beta strandi98 – 1014
Helixi108 – 1103
Helixi114 – 1163
Helixi118 – 1203
Beta strandi121 – 1233
Helixi131 – 14414
Helixi149 – 1524
Helixi161 – 17111
Helixi173 – 1786
Beta strandi180 – 1845
Helixi185 – 19410
Helixi201 – 2077
Turni212 – 2143
Helixi219 – 2235
Helixi227 – 2293
Helixi232 – 2343
Turni235 – 2373
Beta strandi246 – 2505
Helixi253 – 2597
Beta strandi266 – 2683
Turni273 – 2764
Helixi277 – 2804
Beta strandi287 – 30519
Beta strandi313 – 3175
Beta strandi319 – 3213
Beta strandi324 – 3329
Helixi335 – 34410
Helixi348 – 3569
Helixi361 – 3699
Beta strandi380 – 3823
Turni390 – 3923
Beta strandi394 – 3963
Beta strandi399 – 4046
Helixi410 – 43324
Turni434 – 4363
Beta strandi439 – 4479
Helixi448 – 4514
Helixi453 – 46311
Beta strandi467 – 4704
Helixi475 – 48814
Turni490 – 4934
Helixi498 – 5058
Helixi517 – 53822
Beta strandi539 – 5413
Helixi544 – 5518

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3QDKX-ray2.31A/B/C/D3-563[»]
ProteinModelPortaliQ9KBQ3.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9KBQ3.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribulokinase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1069.
HOGENOMiHOG000236884.
KOiK00853.
OMAiMWHESWG.
OrthoDBiEOG644ZKP.

Family and domain databases

HAMAPiMF_00520. Ribulokinase.
InterProiIPR018485. Carb_kinase_FGGY_C.
IPR018484. Carb_kinase_FGGY_N.
IPR005929. L_ribulokin.
[Graphical view]
PfamiPF02782. FGGY_C. 1 hit.
PF00370. FGGY_N. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01234. L-ribulokinase. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9KBQ3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTTKYTIGVD YGTESGRAVL IDLSNGQELA DHVTPYRHGV IDQYLPNTNI
60 70 80 90 100
KLGHEWALQH PLDYVEVLTT SVPAVMKESG VDADDVIGIG VDFTACTMLP
110 120 130 140 150
VDEEGQPLCL LAQYKDNPHS WVKLWKHHAA QDKANAINEM AEKRGEAFLP
160 170 180 190 200
RYGGKISSEW MIAKVWQILD EAEDVYNRTD QFLEATDWIV SQMTGKIVKN
210 220 230 240 250
SCTAGYKAIW HKREGYPSNE FFKALDPRLE HLTTTKLRGD IVPLGERAGG
260 270 280 290 300
LLPEMAEKMG LNPGIAVAVG NVDAHAAVPA VGVTTPGKLV MAMGTSICHM
310 320 330 340 350
LLGEKEQEVE GMCGVVEDGI IPGYLGYEAG QSAVGDIFAW FVKHGVSAAT
360 370 380 390 400
FDEAQEKGVN VHALLEEKAS QLRPGESGLL ALDWWNGNRS ILVDTELSGM
410 420 430 440 450
LLGYTLQTKP EEIYRALLEA TAFGTRAIVD AFHGRGVEVH ELYACGGLPQ
460 470 480 490 500
KNHLLMQIFA DVTNREIKVA ASKQTPALGA AMFASVAAGS EVGGYDSIEE
510 520 530 540 550
AAKKMGRVKD ETFKPIPEHV AIYEKLYQEY VTLHDYFGRG ANDVMKRLKA
560
LKSIQHRPSS LLT
Length:563
Mass (Da):61,668
Last modified:October 1, 2000 - v1
Checksum:iCCBC399006669ACD
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000004 Genomic DNA. Translation: BAB05591.1.
PIRiH83883.
RefSeqiNP_242738.1. NC_002570.2.

Genome annotation databases

EnsemblBacteriaiBAB05591; BAB05591; BAB05591.
GeneIDi892471.
KEGGibha:BH1872.
PATRICi18940874. VBIBacHal18977_1950.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000004 Genomic DNA. Translation: BAB05591.1 .
PIRi H83883.
RefSeqi NP_242738.1. NC_002570.2.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3QDK X-ray 2.31 A/B/C/D 3-563 [» ]
ProteinModelPortali Q9KBQ3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 272558.BH1872.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAB05591 ; BAB05591 ; BAB05591 .
GeneIDi 892471.
KEGGi bha:BH1872.
PATRICi 18940874. VBIBacHal18977_1950.

Phylogenomic databases

eggNOGi COG1069.
HOGENOMi HOG000236884.
KOi K00853.
OMAi MWHESWG.
OrthoDBi EOG644ZKP.

Enzyme and pathway databases

UniPathwayi UPA00145 ; UER00566 .
BioCyci BHAL272558:GJC5-1956-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q9KBQ3.

Family and domain databases

HAMAPi MF_00520. Ribulokinase.
InterProi IPR018485. Carb_kinase_FGGY_C.
IPR018484. Carb_kinase_FGGY_N.
IPR005929. L_ribulokin.
[Graphical view ]
Pfami PF02782. FGGY_C. 1 hit.
PF00370. FGGY_N. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR01234. L-ribulokinase. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis."
    Takami H., Nakasone K., Takaki Y., Maeno G., Sasaki R., Masui N., Fuji F., Hirama C., Nakamura Y., Ogasawara N., Kuhara S., Horikoshi K.
    Nucleic Acids Res. 28:4317-4331(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125.

Entry informationi

Entry nameiARAB_BACHD
AccessioniPrimary (citable) accession number: Q9KBQ3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 23, 2002
Last sequence update: October 1, 2000
Last modified: October 29, 2014
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3