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Q9K993

- XYLA_BACHD

UniProt

Q9K993 - XYLA_BACHD

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Protein
Xylose isomerase
Gene
xylA, BH2757
Organism
Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotation

Cofactori

Binds 2 magnesium ions per subunit By similarity.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei99 – 991 By similarity
Active sitei102 – 1021 By similarity
Metal bindingi230 – 2301Magnesium 1 By similarity
Metal bindingi266 – 2661Magnesium 1 By similarity
Metal bindingi266 – 2661Magnesium 2 By similarity
Metal bindingi269 – 2691Magnesium 2 By similarity
Metal bindingi294 – 2941Magnesium 1 By similarity
Metal bindingi305 – 3051Magnesium 2 By similarity
Metal bindingi307 – 3071Magnesium 2 By similarity
Metal bindingi337 – 3371Magnesium 1 By similarity

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. xylose isomerase activity Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-HAMAP
  2. pentose-phosphate shunt Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Isomerase

Keywords - Biological processi

Carbohydrate metabolism, Pentose shunt, Xylose metabolism

Keywords - Ligandi

Magnesium, Metal-binding

Enzyme and pathway databases

BioCyciBHAL272558:GJC5-2843-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomerase (EC:5.3.1.5)
Gene namesi
Name:xylA
Ordered Locus Names:BH2757
OrganismiBacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Taxonomic identifieri272558 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001258: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 440440Xylose isomeraseUniRule annotation
PRO_0000195762Add
BLAST

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi272558.BH2757.

Structurei

3D structure databases

ProteinModelPortaliQ9K993.
SMRiQ9K993. Positions 3-437.

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.

Phylogenomic databases

eggNOGiCOG2115.
HOGENOMiHOG000252293.
KOiK01805.
OMAiLFHAHIG.
OrthoDBiEOG62NX4R.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00455. Xylose_isom_A.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9K993-1 [UniParc]FASTAAdd to Basket

« Hide

MTFFNDVEKV QYEGPRSTNP YAFKYYNPEE IVAGKTMAEH LRFSIAYWHT    50
FVGDGSDPFG VGTMQRPWDQ YSGMDLAKAR VEAAFEFFEK LNVPYFCFHD 100
VDVAPEGETL ADTYKNLDEI VLMIKDYMKT SKTKLLWNTA NMFTHPRWIH 150
GAATSPNADV YAYAAAKVKK GLEIGKELGA ENYVFWGGRE GYETLLNTNM 200
KLELDNLARF FHMAVDYAKE IGFDAQFLIE PKPKEPTKHQ YDFDVATGIA 250
FLKTHGLDEH FKFNIEANHA TLAGHTFEHE LHLARIHDML GSVDANQGDT 300
LLGWDTDEFP TDLYTTTLAM YEILKNDGLG KGGLNFDAKV RRGSFEANDL 350
FHAHIAGMDS FAIGLKVANQ LLEDRVLEDV IDNRYKSYQS GIGQKIANND 400
TNLKELEAYA LSLGEIKHSS GQQERIKATL NQYLLRVNEY 440
Length:440
Mass (Da):49,967
Last modified:October 1, 2000 - v1
Checksum:iD4EB48A9FCA2D24E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000004 Genomic DNA. Translation: BAB06476.1.
PIRiE83994.
RefSeqiNP_243623.1. NC_002570.2.

Genome annotation databases

EnsemblBacteriaiBAB06476; BAB06476; BAB06476.
GeneIDi893475.
KEGGibha:BH2757.
PATRICi18942700. VBIBacHal18977_2861.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000004 Genomic DNA. Translation: BAB06476.1 .
PIRi E83994.
RefSeqi NP_243623.1. NC_002570.2.

3D structure databases

ProteinModelPortali Q9K993.
SMRi Q9K993. Positions 3-437.
ModBasei Search...

Protein-protein interaction databases

STRINGi 272558.BH2757.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAB06476 ; BAB06476 ; BAB06476 .
GeneIDi 893475.
KEGGi bha:BH2757.
PATRICi 18942700. VBIBacHal18977_2861.

Phylogenomic databases

eggNOGi COG2115.
HOGENOMi HOG000252293.
KOi K01805.
OMAi LFHAHIG.
OrthoDBi EOG62NX4R.

Enzyme and pathway databases

BioCyci BHAL272558:GJC5-2843-MONOMER.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
HAMAPi MF_00455. Xylose_isom_A.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
PRINTSi PR00688. XYLOSISMRASE.
SUPFAMi SSF51658. SSF51658. 1 hit.
TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis."
    Takami H., Nakasone K., Takaki Y., Maeno G., Sasaki R., Masui N., Fuji F., Hirama C., Nakamura Y., Ogasawara N., Kuhara S., Horikoshi K.
    Nucleic Acids Res. 28:4317-4331(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125.

Entry informationi

Entry nameiXYLA_BACHD
AccessioniPrimary (citable) accession number: Q9K993
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 26, 2001
Last sequence update: October 1, 2000
Last modified: May 14, 2014
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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