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Q9K993

- XYLA_BACHD

UniProt

Q9K993 - XYLA_BACHD

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Protein

Xylose isomerase

Gene

xylA

Organism
Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotation

Cofactori

Binds 2 magnesium ions per subunit.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei99 – 991UniRule annotation
Active sitei102 – 1021UniRule annotation
Metal bindingi230 – 2301Magnesium 1UniRule annotation
Metal bindingi266 – 2661Magnesium 1UniRule annotation
Metal bindingi266 – 2661Magnesium 2UniRule annotation
Metal bindingi269 – 2691Magnesium 2UniRule annotation
Metal bindingi294 – 2941Magnesium 1UniRule annotation
Metal bindingi305 – 3051Magnesium 2UniRule annotation
Metal bindingi307 – 3071Magnesium 2UniRule annotation
Metal bindingi337 – 3371Magnesium 1UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. xylose isomerase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-HAMAP
  2. pentose-phosphate shunt Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Isomerase

Keywords - Biological processi

Carbohydrate metabolism, Pentose shunt, Xylose metabolism

Keywords - Ligandi

Magnesium, Metal-binding

Enzyme and pathway databases

BioCyciBHAL272558:GJC5-2843-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
Name:xylAUniRule annotation
Ordered Locus Names:BH2757
OrganismiBacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Taxonomic identifieri272558 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001258: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 440440Xylose isomerasePRO_0000195762Add
BLAST

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Protein-protein interaction databases

STRINGi272558.BH2757.

Structurei

3D structure databases

ProteinModelPortaliQ9K993.
SMRiQ9K993. Positions 3-437.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2115.
HOGENOMiHOG000252293.
KOiK01805.
OMAiLFHAHIG.
OrthoDBiEOG62NX4R.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00455. Xylose_isom_A.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9K993 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTFFNDVEKV QYEGPRSTNP YAFKYYNPEE IVAGKTMAEH LRFSIAYWHT
60 70 80 90 100
FVGDGSDPFG VGTMQRPWDQ YSGMDLAKAR VEAAFEFFEK LNVPYFCFHD
110 120 130 140 150
VDVAPEGETL ADTYKNLDEI VLMIKDYMKT SKTKLLWNTA NMFTHPRWIH
160 170 180 190 200
GAATSPNADV YAYAAAKVKK GLEIGKELGA ENYVFWGGRE GYETLLNTNM
210 220 230 240 250
KLELDNLARF FHMAVDYAKE IGFDAQFLIE PKPKEPTKHQ YDFDVATGIA
260 270 280 290 300
FLKTHGLDEH FKFNIEANHA TLAGHTFEHE LHLARIHDML GSVDANQGDT
310 320 330 340 350
LLGWDTDEFP TDLYTTTLAM YEILKNDGLG KGGLNFDAKV RRGSFEANDL
360 370 380 390 400
FHAHIAGMDS FAIGLKVANQ LLEDRVLEDV IDNRYKSYQS GIGQKIANND
410 420 430 440
TNLKELEAYA LSLGEIKHSS GQQERIKATL NQYLLRVNEY
Length:440
Mass (Da):49,967
Last modified:October 1, 2000 - v1
Checksum:iD4EB48A9FCA2D24E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000004 Genomic DNA. Translation: BAB06476.1.
PIRiE83994.
RefSeqiNP_243623.1. NC_002570.2.

Genome annotation databases

EnsemblBacteriaiBAB06476; BAB06476; BAB06476.
GeneIDi893475.
KEGGibha:BH2757.
PATRICi18942700. VBIBacHal18977_2861.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000004 Genomic DNA. Translation: BAB06476.1 .
PIRi E83994.
RefSeqi NP_243623.1. NC_002570.2.

3D structure databases

ProteinModelPortali Q9K993.
SMRi Q9K993. Positions 3-437.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 272558.BH2757.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAB06476 ; BAB06476 ; BAB06476 .
GeneIDi 893475.
KEGGi bha:BH2757.
PATRICi 18942700. VBIBacHal18977_2861.

Phylogenomic databases

eggNOGi COG2115.
HOGENOMi HOG000252293.
KOi K01805.
OMAi LFHAHIG.
OrthoDBi EOG62NX4R.

Enzyme and pathway databases

BioCyci BHAL272558:GJC5-2843-MONOMER.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
HAMAPi MF_00455. Xylose_isom_A.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
PRINTSi PR00688. XYLOSISMRASE.
SUPFAMi SSF51658. SSF51658. 1 hit.
TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis."
    Takami H., Nakasone K., Takaki Y., Maeno G., Sasaki R., Masui N., Fuji F., Hirama C., Nakamura Y., Ogasawara N., Kuhara S., Horikoshi K.
    Nucleic Acids Res. 28:4317-4331(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125.

Entry informationi

Entry nameiXYLA_BACHD
AccessioniPrimary (citable) accession number: Q9K993
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 26, 2001
Last sequence update: October 1, 2000
Last modified: October 29, 2014
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3