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Protein
Submitted name:

Transcriptional regulator

Gene

BH2766

Organism
Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

ATP-bindingUniRule annotationSAAS annotation, DNA-bindingUniRule annotationSAAS annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciBHAL272558:GJC5-2852-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulatorImported
Gene namesi
Ordered Locus Names:BH2766Imported
OrganismiBacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)Imported
Taxonomic identifieri272558 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001258 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi272558.BH2766.

Structurei

3D structure databases

ProteinModelPortaliQ9K984.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini115 – 18571PAS (PER-ARNT-SIM)InterPro annotationAdd
BLAST
Domaini233 – 28452PAS (PER-ARNT-SIM)InterPro annotationAdd
BLAST
Domaini367 – 597231Sigma-54 factor interactionInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 sigma-54 factor interaction domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108JUB. Bacteria.
COG3829. LUCA.
HOGENOMiHOG000058487.
OMAiIMINPAY.
OrthoDBiEOG6WHNMG.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
3.40.50.300. 1 hit.
3.40.50.720. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR009057. Homeodomain-like.
IPR002197. HTH_Fis.
IPR016040. NAD(P)-bd_dom.
IPR027417. P-loop_NTPase.
IPR000014. PAS.
IPR013767. PAS_fold.
IPR002078. Sigma_54_int.
IPR025662. Sigma_54_int_dom_ATP-bd_1.
IPR025944. Sigma_54_int_dom_CS.
IPR029995. TR_FlbD.
[Graphical view]
PANTHERiPTHR32071:SF21. PTHR32071:SF21. 1 hit.
PfamiPF02954. HTH_8. 1 hit.
PF00989. PAS. 2 hits.
PF00158. Sigma54_activat. 1 hit.
[Graphical view]
PRINTSiPR01590. HTHFIS.
SMARTiSM00382. AAA. 1 hit.
SM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF51735. SSF51735. 1 hit.
SSF52540. SSF52540. 1 hit.
SSF55785. SSF55785. 2 hits.
TIGRFAMsiTIGR00229. sensory_box. 2 hits.
PROSITEiPS50112. PAS. 2 hits.
PS00675. SIGMA54_INTERACT_1. 1 hit.
PS00688. SIGMA54_INTERACT_3. 1 hit.
PS50045. SIGMA54_INTERACT_4. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9K984-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRVAILGAG KGGSALLEML VAAKRFQVQG IVDVNQKAPG INKALMLGIR
60 70 80 90 100
TYDDWTKLPF EQIDVIIEAT GLPQMAETVR TKAGPRIAVI PSHIAYFMFS
110 120 130 140 150
LMEEKQLLVE QTRKHASLQE TILQSTHDGM IAIDEHGSIL LFNHAAERMS
160 170 180 190 200
EVKAEAAIGR PIREILPSSQ LERVVRTKKK EINHRLVLDN GVKIVTTRVP
210 220 230 240 250
LMDQDRCIGA LAVFKDITEV VELAEHVTNL KSVQTMLEAI IKSSEDAISV
260 270 280 290 300
VDELGKGIMI NPAYTRLTGL TPEQIIGQPA TTDISEGESM HMQVLRTRRP
310 320 330 340 350
VRGARMKVGP KKREVVVNVA PVIVDGALKG SVAVIHDMSE IKKLTDELEK
360 370 380 390 400
AKQLIRNLEA KYTFEDIIGS SAEFQVAVKQ AKLAASTPAT ILLRGESGTG
410 420 430 440 450
KELFAHAIHN ASSRKYNKFI RVNCAALSET LLESELFGYE EGAFSGAKRG
460 470 480 490 500
GKRGLFEEAN HGSIFLDEIG ELSSSTQAKF LRVLQEKEIV RVGGTKAIPI
510 520 530 540 550
DVRVIAATNV NLEKSIQDKT FREDLFYRLN KMPIYIPALK ERLDDIPDLV
560 570 580 590 600
DYLLSKLNAD YGRNVEGVTV EALNLLMSYH WPGNVRELEN ILARAMIYMP
610 620 630 640 650
YHSLYITAEH LPSLGVREKS MLKTPETKES EGSLQERVNE YEKQVILETL
660 670 680
AKTGGNKTLA AKQLDISVRN LYYKLEKHGI D
Length:681
Mass (Da):75,663
Last modified:October 1, 2000 - v1
Checksum:i166EABD1525DA4A3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000004 Genomic DNA. Translation: BAB06485.1.
PIRiF83995.
RefSeqiWP_010898914.1. NC_002570.2.

Genome annotation databases

EnsemblBacteriaiBAB06485; BAB06485; BAB06485.
KEGGibha:BH2766.
PATRICi18942718. VBIBacHal18977_2870.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000004 Genomic DNA. Translation: BAB06485.1.
PIRiF83995.
RefSeqiWP_010898914.1. NC_002570.2.

3D structure databases

ProteinModelPortaliQ9K984.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272558.BH2766.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB06485; BAB06485; BAB06485.
KEGGibha:BH2766.
PATRICi18942718. VBIBacHal18977_2870.

Phylogenomic databases

eggNOGiENOG4108JUB. Bacteria.
COG3829. LUCA.
HOGENOMiHOG000058487.
OMAiIMINPAY.
OrthoDBiEOG6WHNMG.

Enzyme and pathway databases

BioCyciBHAL272558:GJC5-2852-MONOMER.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
3.40.50.300. 1 hit.
3.40.50.720. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR009057. Homeodomain-like.
IPR002197. HTH_Fis.
IPR016040. NAD(P)-bd_dom.
IPR027417. P-loop_NTPase.
IPR000014. PAS.
IPR013767. PAS_fold.
IPR002078. Sigma_54_int.
IPR025662. Sigma_54_int_dom_ATP-bd_1.
IPR025944. Sigma_54_int_dom_CS.
IPR029995. TR_FlbD.
[Graphical view]
PANTHERiPTHR32071:SF21. PTHR32071:SF21. 1 hit.
PfamiPF02954. HTH_8. 1 hit.
PF00989. PAS. 2 hits.
PF00158. Sigma54_activat. 1 hit.
[Graphical view]
PRINTSiPR01590. HTHFIS.
SMARTiSM00382. AAA. 1 hit.
SM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF51735. SSF51735. 1 hit.
SSF52540. SSF52540. 1 hit.
SSF55785. SSF55785. 2 hits.
TIGRFAMsiTIGR00229. sensory_box. 2 hits.
PROSITEiPS50112. PAS. 2 hits.
PS00675. SIGMA54_INTERACT_1. 1 hit.
PS00688. SIGMA54_INTERACT_3. 1 hit.
PS50045. SIGMA54_INTERACT_4. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis."
    Takami H., Nakasone K., Takaki Y., Maeno G., Sasaki R., Masui N., Fuji F., Hirama C., Nakamura Y., Ogasawara N., Kuhara S., Horikoshi K.
    Nucleic Acids Res. 28:4317-4331(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125Imported.

Entry informationi

Entry nameiQ9K984_BACHD
AccessioniPrimary (citable) accession number: Q9K984
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: March 16, 2016
This is version 108 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.