Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Exodeoxyribonuclease 7 large subunit

Gene

xseA

Organism
Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.UniRule annotation

Catalytic activityi

Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Exonuclease, Hydrolase, Nuclease

Enzyme and pathway databases

BioCyciBHAL272558:GJC5-2869-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Exodeoxyribonuclease 7 large subunitUniRule annotation (EC:3.1.11.6UniRule annotation)
Alternative name(s):
Exodeoxyribonuclease VII large subunitUniRule annotation
Short name:
Exonuclease VII large subunitUniRule annotation
Gene namesi
Name:xseAUniRule annotation
Ordered Locus Names:BH2783
OrganismiBacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Taxonomic identifieri272558 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001258 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 458458Exodeoxyribonuclease 7 large subunitPRO_0000197827Add
BLAST

Interactioni

Subunit structurei

Heterooligomer composed of large and small subunits.UniRule annotation

Protein-protein interaction databases

STRINGi272558.BH2783.

Family & Domainsi

Sequence similaritiesi

Belongs to the XseA family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105DVS. Bacteria.
COG1570. LUCA.
HOGENOMiHOG000229265.
KOiK03601.
OMAiCINALMQ.
OrthoDBiPOG091H02EK.

Family and domain databases

HAMAPiMF_00378. Exonuc_7_L. 1 hit.
InterProiIPR003753. Exonuc_VII_L.
IPR020579. Exonuc_VII_lsu_C.
IPR025824. OB-fold_nuc-bd_dom.
[Graphical view]
PfamiPF02601. Exonuc_VII_L. 1 hit.
PF13742. tRNA_anti_2. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00237. xseA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9K967-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGHQPILTV SEVTRHLKRT IEDDPLLQDV WMRGEISNFK HHSRGHMYFT
60 70 80 90 100
LKDEHAKMSA VMFAGNNRFL NFKPENGMKV IVRGEVNVYE PFGQYQLYAL
110 120 130 140 150
EMQPDGIGNL YLAYEQLKER LEQEGLFKEE NKKPLPPVAR QIAIVTSPTG
160 170 180 190 200
AAIRDIASTI KRRFPVAQLT LLPVLVQGEE APHSIAKAIR QANEVGGFDL
210 220 230 240 250
LIVGRGGGSI EELWAFNEEL VARAIYQSVI PIISAVGHET DYTIADFVAD
260 270 280 290 300
VRAATPTGAA ELAVPDLKEL ISRVNQYTER LKRAQHELLK RQKEHLQRLQ
310 320 330 340 350
KSYAFRYPAQ LVKQKELELD QQLERLTKHQ RRMVSDAKDR LSQLEYRLKR
360 370 380 390 400
IHPEGRLRQA EQARVKLEVL LKKEFQQMME RKEQQFQQAI SSLNLLSPLR
410 420 430 440 450
VMERGYALPY KAKTQELIKS VKQVRMNDRL HLRVTDGQLI CDVKEIESES

GGEGYDQK
Length:458
Mass (Da):52,595
Last modified:October 1, 2000 - v1
Checksum:iECDB04EE213BC6FF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000004 Genomic DNA. Translation: BAB06502.1.
PIRiG83997.
RefSeqiWP_010898931.1. NC_002570.2.

Genome annotation databases

EnsemblBacteriaiBAB06502; BAB06502; BAB06502.
KEGGibha:BH2783.
PATRICi18942758. VBIBacHal18977_2890.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000004 Genomic DNA. Translation: BAB06502.1.
PIRiG83997.
RefSeqiWP_010898931.1. NC_002570.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272558.BH2783.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB06502; BAB06502; BAB06502.
KEGGibha:BH2783.
PATRICi18942758. VBIBacHal18977_2890.

Phylogenomic databases

eggNOGiENOG4105DVS. Bacteria.
COG1570. LUCA.
HOGENOMiHOG000229265.
KOiK03601.
OMAiCINALMQ.
OrthoDBiPOG091H02EK.

Enzyme and pathway databases

BioCyciBHAL272558:GJC5-2869-MONOMER.

Family and domain databases

HAMAPiMF_00378. Exonuc_7_L. 1 hit.
InterProiIPR003753. Exonuc_VII_L.
IPR020579. Exonuc_VII_lsu_C.
IPR025824. OB-fold_nuc-bd_dom.
[Graphical view]
PfamiPF02601. Exonuc_VII_L. 1 hit.
PF13742. tRNA_anti_2. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00237. xseA. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiEX7L_BACHD
AccessioniPrimary (citable) accession number: Q9K967
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 1, 2001
Last sequence update: October 1, 2000
Last modified: September 7, 2016
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.