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Protein
Submitted name:

Transcriptional regulator, MarR family

Gene

NMB1585

Organism
Neisseria meningitidis serogroup B (strain MC58)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciNMEN122586:GHGG-1627-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator, MarR familyImported
Gene namesi
Ordered Locus Names:NMB1585Imported
OrganismiNeisseria meningitidis serogroup B (strain MC58)Imported
Taxonomic identifieri122586 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNeisserialesNeisseriaceaeNeisseria
Proteomesi
  • UP000000425 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PaxDbiQ9JYH5.

Interactioni

Protein-protein interaction databases

STRINGi122586.NMB1585.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3G3ZX-ray2.10A/B1-143[»]
ProteinModelPortaliQ9JYH5.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9JYH5.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 139139HTH marR-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 HTH marR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105RFN. Bacteria.
COG1846. LUCA.
HOGENOMiHOG000219033.
OMAiKQICDEW.
OrthoDBiEOG6NGVRR.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR000835. HTH_MarR-typ.
IPR023187. Tscrpt_reg_MarR-type_CS.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF01047. MarR. 1 hit.
[Graphical view]
SMARTiSM00347. HTH_MARR. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS01117. HTH_MARR_1. 1 hit.
PS50995. HTH_MARR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9JYH5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNQLDQLGTR INLICNVFDK WIGQQDLNYN LFAVLYTLAT EGSRTQKHIG
60 70 80 90 100
EKWSLPKQTV SGVCKTLAGQ GLIEWQEGEQ DRRKRLLSLT ETGKAYAAPL
110 120 130 140
TESAQEFSDK VFATFGDKRT TRLFADLDAL AEVMEKTISE NKK
Length:143
Mass (Da):16,161
Last modified:October 1, 2000 - v1
Checksum:iD8242D037917C4B0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE002098 Genomic DNA. Translation: AAF41938.1.
PIRiC81065.
RefSeqiNP_274591.1. NC_003112.2.
WP_002222199.1. NC_003112.2.

Genome annotation databases

EnsemblBacteriaiAAF41938; AAF41938; NMB1585.
GeneIDi904237.
KEGGinme:NMB1585.
PATRICi20359036. VBINeiMen85645_2036.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE002098 Genomic DNA. Translation: AAF41938.1.
PIRiC81065.
RefSeqiNP_274591.1. NC_003112.2.
WP_002222199.1. NC_003112.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3G3ZX-ray2.10A/B1-143[»]
ProteinModelPortaliQ9JYH5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi122586.NMB1585.

Proteomic databases

PaxDbiQ9JYH5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAF41938; AAF41938; NMB1585.
GeneIDi904237.
KEGGinme:NMB1585.
PATRICi20359036. VBINeiMen85645_2036.

Phylogenomic databases

eggNOGiENOG4105RFN. Bacteria.
COG1846. LUCA.
HOGENOMiHOG000219033.
OMAiKQICDEW.
OrthoDBiEOG6NGVRR.

Enzyme and pathway databases

BioCyciNMEN122586:GHGG-1627-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ9JYH5.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR000835. HTH_MarR-typ.
IPR023187. Tscrpt_reg_MarR-type_CS.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF01047. MarR. 1 hit.
[Graphical view]
SMARTiSM00347. HTH_MARR. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS01117. HTH_MARR_1. 1 hit.
PS50995. HTH_MARR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MC58Imported.
  2. "The structure of NMB1585, a MarR-family regulator from Neisseria meningitidis."
    Nichols C.E., Sainsbury S., Ren J., Walter T.S., Verma A., Stammers D.K., Saunders N.J., Owens R.J.
    Acta Crystallogr. F 65:204-209(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS).

Entry informationi

Entry nameiQ9JYH5_NEIMB
AccessioniPrimary (citable) accession number: Q9JYH5
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: March 16, 2016
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.