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Protein
Submitted name:

Glycine receptor alpha 3 subunit

Gene

Glra3

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. extracellular ligand-gated ion channel activity Source: InterPro

GO - Biological processi

  1. gamma-aminobutyric acid receptor clustering Source: MGI
  2. neurotransmitter-gated ion channel clustering Source: MGI
  3. receptor clustering Source: MGI
Complete GO annotation...

Keywords - Molecular functioni

Ion channelSAAS annotation, ReceptorImported

Keywords - Biological processi

Ion transport, Transport

Names & Taxonomyi

Protein namesi
Submitted name:
Glycine receptor alpha 3 subunitImported
Gene namesi
Name:Glra3Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:95749. Glra3.

Subcellular locationi

GO - Cellular componenti

  1. axon terminus Source: MGI
  2. external side of plasma membrane Source: MGI
  3. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cell membraneSAAS annotation, Membrane

Expressioni

Gene expression databases

BgeeiQ9JL29.
ExpressionAtlasiQ9JL29. baseline.
GenevestigatoriQ9JL29.

Interactioni

Structurei

3D structure databases

ProteinModelPortaliQ9JL29.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

HOVERGENiHBG103356.

Family and domain databases

Gene3Di2.70.170.10. 1 hit.
InterProiIPR006028. GABAA/Glycine_rcpt.
IPR006202. Neur_chan_lig-bd.
IPR006201. Neur_channel.
IPR006029. Neurotrans-gated_channel_TM.
[Graphical view]
PANTHERiPTHR18945. PTHR18945. 1 hit.
PfamiPF02931. Neur_chan_LBD. 1 hit.
PF02932. Neur_chan_memb. 1 hit.
[Graphical view]
PRINTSiPR00253. GABAARECEPTR.
SUPFAMiSSF63712. SSF63712. 1 hit.
SSF90112. SSF90112. 1 hit.

Sequencei

Sequence statusi: Fragment.

Q9JL29-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
DLKNFPMDVQ TCIMQLESFG YTMNDLIFEW QDEAPVQVAE GLTLPQFLLK
60 70 80 90 100
EEKDLRYCTK HYNTGKFTCI EVRFHLERQM GYYLIQMYIP SLLIVILSWV
110 120 130 140
SFWINMDAAP ARVALGITTV LTMTTQSSGS RASLPKVSYV KAIDIWM
Length:147
Mass (Da):17,003
Last modified:September 30, 2000 - v1
Checksum:iA3FB159BEDDB3F05
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported
Non-terminal residuei147 – 1471Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF214575 mRNA. Translation: AAF34619.1.
UniGeneiMm.307061.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF214575 mRNA. Translation: AAF34619.1.
UniGeneiMm.307061.

3D structure databases

ProteinModelPortaliQ9JL29.
ModBaseiSearch...
MobiDBiSearch...

Chemistry

BindingDBiQ9JL29.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

MGIiMGI:95749. Glra3.

Phylogenomic databases

HOVERGENiHBG103356.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiQ9JL29.
ExpressionAtlasiQ9JL29. baseline.
GenevestigatoriQ9JL29.

Family and domain databases

Gene3Di2.70.170.10. 1 hit.
InterProiIPR006028. GABAA/Glycine_rcpt.
IPR006202. Neur_chan_lig-bd.
IPR006201. Neur_channel.
IPR006029. Neurotrans-gated_channel_TM.
[Graphical view]
PANTHERiPTHR18945. PTHR18945. 1 hit.
PfamiPF02931. Neur_chan_LBD. 1 hit.
PF02932. Neur_chan_memb. 1 hit.
[Graphical view]
PRINTSiPR00253. GABAARECEPTR.
SUPFAMiSSF63712. SSF63712. 1 hit.
SSF90112. SSF90112. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Expression and function of glycine receptors in striatal cholinergic interneurons from rat and mouse."
    Sergeeva O.A., Haas H.L.
    Neuroscience 104:1043-1055(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6Imported.
    Tissue: Dorsal striatumImported.

Entry informationi

Entry nameiQ9JL29_MOUSE
AccessioniPrimary (citable) accession number: Q9JL29
Entry historyi
Integrated into UniProtKB/TrEMBL: September 30, 2000
Last sequence update: September 30, 2000
Last modified: March 31, 2015
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.