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Q9JKL6 (Q9JKL6_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
BRCA1 EMBL AAF40440.1
Gene names
Name:Brca1 RGD 2218
OrganismRattus norvegicus (Rat) EMBL AAF40440.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length256 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Ontologies

Gene Ontology (GO)
   Biological_processDNA repair

Inferred from electronic annotation. Source: InterPro

   Cellular_componentnucleus

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: InterPro

zinc ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAF40440.1
Non-terminal residue2561 EMBL AAF40440.1

Sequences

Sequence LengthMass (Da)Tools
Q9JKL6 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: AC9825619791F772

FASTA25628,497
        10         20         30         40         50         60 
RASSLQRGTR SLLFTEDRLD AEKAEFCDRS KQSGAAVSQQ SRWADSKETC NGRPVPRTEG 

        70         80         90        100        110        120 
KADPNVDSLC GRKQWNHPKS LCPENSGATT DVPWITLNSS IQKVNEWFSR TGEMLTSDNA 

       130        140        150        160        170        180 
SDRRPASNAE AAVVLEVSNE VDGCFSSSKK IDLVAPDPDN AVMCTSGRDF SKPVENIIND 

       190        200        210        220        230        240 
KIFGKTYQRK GSRPHLNHVT EIIGTFTTEP QIIQEQPFTN KLKRKRSTCL HPEDFIKKAD 

       250 
LTVVQRISEN LNQGTN

« Hide

References

[1]"BRCA1 Expression in the Mammary Gland Correlates with Genetic Susceptibility of Rat Strains to Mammary Cancer."
Williams-Hill D.M., Koehler E.Y., Hill C.K.
Submitted (FEB-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Wistar-Furth EMBL AAF40440.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AF234782 mRNA. Translation: AAF40440.1.
IPIIPI00202716.
UniGeneRn.217584.
Rn.48840.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING10116.ENSRNOP00000028109.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

RGD2218. Brca1.

Phylogenomic databases

InParanoidQ9JKL6.

Gene expression databases

GenevestigatorQ9JKL6.

Family and domain databases

InterProIPR011364. BRCA1.
IPR025994. BRCA1_serine_dom.
[Graphical view]
PANTHERPTHR13763. PTHR13763. 1 hit.
PfamPF12820. BRCT_assoc. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio35585047.

Entry information

Entry nameQ9JKL6_RAT
AccessionPrimary (citable) accession number: Q9JKL6
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: April 3, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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