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Protein
Submitted name:

CD40 protein

Gene
N/A
Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
CD40 proteinImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_500433192024 – 169Sequence analysisAdd BLAST146

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi38 ↔ 51PROSITE-ProRule annotation
Disulfide bondi41 ↔ 59PROSITE-ProRule annotation
Disulfide bondi62 ↔ 77PROSITE-ProRule annotation
Disulfide bondi125 ↔ 143PROSITE-ProRule annotation

Keywords - PTMi

Disulfide bondPROSITE-ProRule annotation

Structurei

3D structure databases

ProteinModelPortaliQ9JKE0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini25 – 59TNFR-CysInterPro annotationAdd BLAST35
Repeati25 – 59TNFR-CysPROSITE-ProRule annotationAdd BLAST35
Domaini61 – 103TNFR-CysInterPro annotationAdd BLAST43
Repeati61 – 103TNFR-CysPROSITE-ProRule annotationAdd BLAST43
Domaini104 – 143TNFR-CysInterPro annotationAdd BLAST40
Repeati104 – 143TNFR-CysPROSITE-ProRule annotationAdd BLAST40

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410IY0H Eukaryota
ENOG4112DB5 LUCA
HOVERGENiHBG005117
PhylomeDBiQ9JKE0

Family and domain databases

InterProiView protein in InterPro
IPR001368 TNFR/NGFR_Cys_rich_reg
IPR020435 TNFR_5
PfamiView protein in Pfam
PF00020 TNFR_c6, 2 hits
PRINTSiPR01922 TNFACTORR5
SMARTiView protein in SMART
SM00208 TNFR, 3 hits
PROSITEiView protein in PROSITE
PS00652 TNFR_NGFR_1, 1 hit
PS50050 TNFR_NGFR_2, 3 hits

Sequencei

Sequence statusi: Fragment.

Q9JKE0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLPLPQLCAL WGCLLTAVHL GQCVTCSDKQ YLQGGECCDL CQPGNRLVSH
60 70 80 90 100
CTALEKTQCQ PCDSGEFSAH WNREIRCHQH RHCELNQGLQ VKKEGTAVSD
110 120 130 140 150
TVCTCKEGQH CASKECETCA QHRPCGPGFG VVQMATETTD TVCQPCPVGF
160
FSNGSSLFEK CHPWTSCED
Length:169
Mass (Da):18,525
Last modified:June 1, 2001 - v2
Checksum:iF199D91EFA224A26
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei169Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF241231 mRNA Translation: AAF43717.2
UniGeneiRn.25180

Genome annotation databases

UCSCiRGD:619830 rat

Entry informationi

Entry nameiQ9JKE0_RAT
AccessioniPrimary (citable) accession number: Q9JKE0
Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: June 1, 2001
Last modified: May 23, 2018
This is version 80 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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