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Q9JKE0 (Q9JKE0_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Cd40 RGD 619830
Synonyms:Tnfrsf5 RGD 619830
OrganismRattus norvegicus (Rat) EMBL AAF43717.2
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length169 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue1691 EMBL AAF43717.2

Sequences

Sequence LengthMass (Da)Tools
Q9JKE0 [UniParc].

Last modified June 1, 2001. Version 2.
Checksum: F199D91EFA224A26

FASTA16918,525
        10         20         30         40         50         60 
MLPLPQLCAL WGCLLTAVHL GQCVTCSDKQ YLQGGECCDL CQPGNRLVSH CTALEKTQCQ 

        70         80         90        100        110        120 
PCDSGEFSAH WNREIRCHQH RHCELNQGLQ VKKEGTAVSD TVCTCKEGQH CASKECETCA 

       130        140        150        160 
QHRPCGPGFG VVQMATETTD TVCQPCPVGF FSNGSSLFEK CHPWTSCED 

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References

[1]"Cytokine-inducible CD40 gene expression in vascular smooth muscle cells is mediated by nuclear factor kappaB and signal transducer and activation of transcription-1."
Krzesz R., Wagner A.H., Cattaruzza M., Hecker M.
FEBS Lett. 453:191-196(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Wistar EMBL AAF43717.2.
Tissue: Smooth muscle EMBL AAF43717.2.
[2]Krzesz R., Hecker M.
Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Wistar EMBL AAF43717.2.
Tissue: Smooth muscle EMBL AAF43717.2.
[3]Gao D., Hecker M.
Submitted (MAR-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Wistar EMBL AAF43717.2.
Tissue: Smooth muscle EMBL AAF43717.2.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF241231 mRNA. Translation: AAF43717.2.
UniGeneRn.25180.

3D structure databases

ProteinModelPortalQ9JKE0.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

UCSCRGD:619830. rat.

Organism-specific databases

RGD619830. Cd40.

Phylogenomic databases

HOVERGENHBG005117.
InParanoidQ9JKE0.
PhylomeDBQ9JKE0.

Gene expression databases

GenevestigatorQ9JKE0.

Family and domain databases

InterProIPR001368. TNFR/NGFR_Cys_rich_reg.
IPR020435. TNFR_5.
[Graphical view]
PfamPF00020. TNFR_c6. 1 hit.
[Graphical view]
PRINTSPR01922. TNFACTORR5.
SMARTSM00208. TNFR. 3 hits.
[Graphical view]
PROSITEPS00652. TNFR_NGFR_1. 1 hit.
PS50050. TNFR_NGFR_2. 3 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9JKE0_RAT
AccessionPrimary (citable) accession number: Q9JKE0
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: June 1, 2001
Last modified: April 16, 2014
This is version 56 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)