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Q9JKE0

- Q9JKE0_RAT

UniProt

Q9JKE0 - Q9JKE0_RAT

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Protein
Submitted name:

CD40 protein

Gene

Cd40

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. antigen binding Source: RGD

GO - Biological processi

  1. cellular response to lipopolysaccharide Source: RGD
  2. inflammatory response Source: RGD
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
CD40 proteinImported
Gene namesi
Name:Cd40Imported
Synonyms:Tnfrsf5Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi619830. Cd40.

Subcellular locationi

GO - Cellular componenti

  1. cell surface Source: RGD
  2. cytoplasm Source: RGD
  3. extracellular space Source: RGD
Complete GO annotation...

Expressioni

Gene expression databases

GenevestigatoriQ9JKE0.

Structurei

3D structure databases

ProteinModelPortaliQ9JKE0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG005117.
PhylomeDBiQ9JKE0.

Family and domain databases

InterProiIPR001368. TNFR/NGFR_Cys_rich_reg.
IPR020435. TNFR_5.
[Graphical view]
PfamiPF00020. TNFR_c6. 1 hit.
[Graphical view]
PRINTSiPR01922. TNFACTORR5.
SMARTiSM00208. TNFR. 3 hits.
[Graphical view]
PROSITEiPS00652. TNFR_NGFR_1. 1 hit.
PS50050. TNFR_NGFR_2. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q9JKE0-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MLPLPQLCAL WGCLLTAVHL GQCVTCSDKQ YLQGGECCDL CQPGNRLVSH
60 70 80 90 100
CTALEKTQCQ PCDSGEFSAH WNREIRCHQH RHCELNQGLQ VKKEGTAVSD
110 120 130 140 150
TVCTCKEGQH CASKECETCA QHRPCGPGFG VVQMATETTD TVCQPCPVGF
160
FSNGSSLFEK CHPWTSCED
Length:169
Mass (Da):18,525
Last modified:June 1, 2001 - v2
Checksum:iF199D91EFA224A26
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei169 – 1691Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF241231 mRNA. Translation: AAF43717.2.
UniGeneiRn.25180.

Genome annotation databases

UCSCiRGD:619830. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF241231 mRNA. Translation: AAF43717.2 .
UniGenei Rn.25180.

3D structure databases

ProteinModelPortali Q9JKE0.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

UCSCi RGD:619830. rat.

Organism-specific databases

RGDi 619830. Cd40.

Phylogenomic databases

HOVERGENi HBG005117.
PhylomeDBi Q9JKE0.

Gene expression databases

Genevestigatori Q9JKE0.

Family and domain databases

InterProi IPR001368. TNFR/NGFR_Cys_rich_reg.
IPR020435. TNFR_5.
[Graphical view ]
Pfami PF00020. TNFR_c6. 1 hit.
[Graphical view ]
PRINTSi PR01922. TNFACTORR5.
SMARTi SM00208. TNFR. 3 hits.
[Graphical view ]
PROSITEi PS00652. TNFR_NGFR_1. 1 hit.
PS50050. TNFR_NGFR_2. 3 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Cytokine-inducible CD40 gene expression in vascular smooth muscle cells is mediated by nuclear factor kappaB and signal transducer and activation of transcription-1."
    Krzesz R., Wagner A.H., Cattaruzza M., Hecker M.
    FEBS Lett. 453:191-196(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: WistarImported.
    Tissue: Smooth muscleImported.
  2. Krzesz R., Hecker M.
    Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: WistarImported.
    Tissue: Smooth muscleImported.
  3. Gao D., Hecker M.
    Submitted (MAR-2001) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: WistarImported.
    Tissue: Smooth muscleImported.

Entry informationi

Entry nameiQ9JKE0_RAT
AccessioniPrimary (citable) accession number: Q9JKE0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: June 1, 2001
Last modified: October 29, 2014
This is version 60 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)