Protein tyrosine phosphatase CD45 - Rattus norvegicus (Rat)

Contribute

Read comments (0) or add your own

Unreviewed, UniProtKB/TrEMBL Q9JK90 (Q9JK90_RAT)

Last modified January 19, 2010. Version 36. History...

Clusters with 100%, 90%, 50% identity |

Third-party data |

Customize display

text xml rdf/xml gff fasta

Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

Names and origin

Protein names

Submitted name:
Protein tyrosine phosphatase CD45 EMBL AAF72179.1

Gene names

Name:	Ptprc RGD 3451
Synonyms:	CD45 EMBL AAF72179.1

Organism

Rattus norvegicus (Rat) EMBL AAF72179.1

Taxonomic identifier

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	428 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level.

Ontologies

Gene Ontology (GO)
Biological process	protein amino acid dephosphorylation Traceable author statement. Source: RGD response to gamma radiation Inferred from direct assay. Source: RGD
Cellular component	cell surface Inferred from direct assay. Source: RGD integral to membrane Inferred from direct assay. Source: RGD internal side of plasma membrane Traceable author statement. Source: RGD
Molecular function	protein binding Inferred from physical interaction. Source: RGD protein kinase regulator activity Traceable author statement. Source: RGD transmembrane receptor protein tyrosine phosphatase activity Traceable author statement. Source: RGD
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Experimental info

Non-terminal residue

1

EMBL AAF72179.1

Non-terminal residue

1

EMBL AAF72179.1

Sequences

Sequence

Length

Mass (Da)

Tools

Q9JK90-1 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: CF5D94F2A79819EA
Show »

428

48,016

        10         20         30         40         50         60 
WLKLLAFSLA LLGPEVFVTG QGTTDDGANL TTPAPSTLGF GSNTTTSTEI ATPQTKPSCD 

        70         80         90        100        110        120 
EKFGNVTVRY IYDDSSKNFN ANLEGDKKPK CEHTDCEKEL KNLPECSQKN VTLSNGSCTP 

       130        140        150        160        170        180 
DKIINLDVPP GTHNFNLTNC TPDIEANTSI CLEWKIKNKF TCDIQKISYN YRCTPEMKTF 

       190        200        210        220        230        240 
PLDKRRKLWL HNLTVRTNYT CAAEVLYNNV ILLKQDRRVQ TDFGTPEMLP HVQCMNSTNS 

       250        260        270        280        290        300 
TTLVSWAEPA SKHHGYILCY KKTPSEKCEN LANDVNSFEV KNLRPYTEYT VSLFGYVIGR 

       310        320        330        340        350        360 
VQRNGPAKDC NFRTKAARPG KVNGMKTSRA SDNSINVTCN SPYEINGPEA RYILEVKSGG 

       370        380        390        400        410        420 
SLVKTFNQST CKFVVDNLYY STDYEFLVYF YNGEYLGDPE IKPQSTSYNS KALIIFLVFL 


IIVTSIAL

References

[1]	"Molecular basis of antigenic differences between the RT7 alleles of rat CD45." Symons A., Barclay A.N. Immunogenetics 51:747-750(2000) [PubMed: 10941847] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: PVG-RT7b EMBL AAF72179.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF251010 mRNA. Translation: AAF72179.1.
IPI	IPI00777870.
UniGene	Rn.90166
3D structure databases
SMR	Q9JK90. Positions 222-397.
ModBase	Search...
Protein-protein interaction databases
STRING	Q9JK90.
Genome annotation databases
Ensembl	ENSRNOT00000000814; ENSRNOP00000000814; ENSRNOG00000000655; Rattus norvegicus. [Genome view]
Phylogenomic databases
HOVERGEN	Q9JK90.
Gene expression databases
ArrayExpress	Q9JK90.
Genevestigator	Q9JK90.
Family and domain databases
InterPro	IPR008957. Fibronectin_typ-III-like_fold. IPR003961. FN_III. [Graphical view]
Gene3D	G3DSA:2.60.40.30. FN_III-like. 1 hit.
Pfam	PF00041. fn3. 1 hit. [Graphical view]
SMART	SM00060. FN3. 2 hits. [Graphical view]
PROSITE	PS50853. FN3. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9JK90_RAT

Accession

Primary (citable) accession number: Q9JK90

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2000
Last sequence update:	October 1, 2000
Last modified:	January 19, 2010
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information