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Q9JJZ3 (Q9JJZ3_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 81. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Shank3b protein EMBL CAB89816.1
Gene names
Name:Shank3 MGI 1930016 Ensembl ENSMUSP00000064477
Synonyms:shank3 EMBL CAB89816.1
OrganismMus musculus (Mouse) [Reference proteome]
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length709 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 PDZ (DHR) domain. RuleBase RU003354

Contains 1 SH3 domain. SAAS SAAS011511

Sequences

Sequence LengthMass (Da)Tools
Q9JJZ3 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: 5CF7C46C7DC4B486

FASTA70977,277
        10         20         30         40         50         60 
MGLCGSLLPT FSLSEQFRYK RRVYAQNLID DKQFAKLHTK ANLKKFMDYV QLHSTDKVAR 

        70         80         90        100        110        120 
LLDKGLDPNF HDPDSGECPL SLAAQLDNAT DLLKVLRNGG AHLDFRTRDG LTAVHCATRQ 

       130        140        150        160        170        180 
RNAGALTTLL DLGASPDYKD SRGLTPLYHS ALGGGDALCC ELLLHDHAQL GTTDENGWQE 

       190        200        210        220        230        240 
IHQACRFGHV QHLEHLLFYG ANMGAQNASG NTALHICALY NQESCARVLL FRGANKDVRN 

       250        260        270        280        290        300 
YNSQTAFQVA IIAGNFELAE VIKTHKDSDV VPFRETPSYA KRRRLAGPSG LASPRPLQRS 

       310        320        330        340        350        360 
ASDINLKGDQ PAASPGPTLR SLPHQLLLQR LQEEKDRDRD GELENDISGP SAGRGGHNKI 

       370        380        390        400        410        420 
SPSGPGGSGP APGPGPASPA PPAPPPRGPK RKLYSAVPGR KFIAVKAHSP QGEGEIPLHR 

       430        440        450        460        470        480 
GEAVKVLSIG EGGFWEGTVK GRTGWFPADC VEEVQMRQYD TRHETREDRT KRLFRHYTVG 

       490        500        510        520        530        540 
SYDSLTSHSD YVIDDKVAIL QKRDHEGFGF VLRGAKAETP IEEFTPTPAF PALQYLESVD 

       550        560        570        580        590        600 
VEGVAWRAGL RTGDFLIEVN GVNVVKVGHK QVVGLIRQGG NRLVMKVVSV TRKPEEDGAR 

       610        620        630        640        650        660 
RRAPPPPKRA PSTTLTLRSK SMTAELEELE KLDEILAVAA EPTLRPDIAD ADSRAATVKQ 

       670        680        690        700 
RPTSRRITPA EISSLFERQG LPGPEKLPGS LRKGIPRTKS VGSSAASVS 

« Hide

References

« Hide 'large scale' references
[1]"Interaction of the Na+/Phosphate Cotransporter Type II with rSHANK."
Dehmelt L., Nalbant P., Werner A.
Submitted (SEP-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57B1/6J EMBL CAB89816.1.
Tissue: Kidney EMBL CAB89816.1.
[2]"Lineage-specific biology revealed by a finished genome assembly of the mouse."
Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S. expand/collapse author list , Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K., Eichler E.E., Ponting C.P.
PLoS Biol. 7:E1000112-E1000112(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C57BL/6J Ensembl ENSMUSP00000064477.
[3]Ensembl
Submitted (FEB-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: C57BL/6J Ensembl ENSMUSP00000064477.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC122401 Genomic DNA. No translation available.
AC137513 Genomic DNA. No translation available.
AJ245904 mRNA. Translation: CAB89816.1.
IPIIPI00407453.
UniGeneMm.146855.

3D structure databases

HSSPHSSP built from PDB template 1Q3O based on UniProtKB Q9WV48.
SMRQ9JJZ3. Positions 44-342, 413-455, 489-594.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000066545; ENSMUSP00000064477; ENSMUSG00000022623.
UCSCuc007xhb.2. mouse.

Organism-specific databases

MGIMGI:1930016. Shank3.

Phylogenomic databases

GeneTreeENSGT00510000046474.
HOGENOMHOG000198621.
HOVERGENHBG078069.

Gene expression databases

GenevestigatorQ9JJZ3.

Family and domain databases

Gene3D1.25.40.20. 1 hit.
InterProIPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
IPR001478. PDZ.
IPR011511. SH3_2.
IPR001452. SH3_domain.
[Graphical view]
PfamPF12796. Ank_2. 2 hits.
PF00595. PDZ. 1 hit.
PF07653. SH3_2. 1 hit.
[Graphical view]
SMARTSM00248. ANK. 5 hits.
SM00228. PDZ. 1 hit.
SM00326. SH3. 1 hit.
[Graphical view]
SUPFAMSSF48403. ANK. 1 hit.
SSF50156. PDZ. 1 hit.
SSF50044. SH3. 1 hit.
PROSITEPS50297. ANK_REP_REGION. 1 hit.
PS50088. ANK_REPEAT. 4 hits.
PS50106. PDZ. 1 hit.
PS50002. SH3. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSSHANK3. mouse.
SOURCESearch...

Entry information

Entry nameQ9JJZ3_MOUSE
AccessionPrimary (citable) accession number: Q9JJZ3
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: May 1, 2013
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)