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Protein
Submitted name:

Soluble FLT-1

Gene

Flt1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Soluble FLT-1Imported
Gene namesi
Name:Flt1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi2621. Flt1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 26Sequence analysisAdd BLAST26
ChainiPRO_500432752727 – 687Sequence analysisAdd BLAST661

Proteomic databases

PaxDbiQ9JJ08.
PRIDEiQ9JJ08.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000001248.

Structurei

3D structure databases

ProteinModelPortaliQ9JJ08.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini32 – 121Ig-like (immunoglobulin-like)InterPro annotationAdd BLAST90
Domaini230 – 327Ig-like (immunoglobulin-like)InterPro annotationAdd BLAST98
Domaini349 – 404Ig-like (immunoglobulin-like)InterPro annotationAdd BLAST56
Domaini428 – 549Ig-like (immunoglobulin-like)InterPro annotationAdd BLAST122
Domaini556 – 655Ig-like (immunoglobulin-like)InterPro annotationAdd BLAST100

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG0200. Eukaryota.
COG0515. LUCA.
HOVERGENiHBG053003.

Family and domain databases

Gene3Di2.60.40.10. 6 hits.
InterProiIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR013098. Ig_I-set.
IPR003599. Ig_sub.
IPR003598. Ig_sub2.
IPR009135. VEGFR1_rcpt.
[Graphical view]
PfamiPF07679. I-set. 1 hit.
[Graphical view]
PRINTSiPR01833. VEGFRECEPTR1.
SMARTiSM00409. IG. 6 hits.
SM00408. IGc2. 4 hits.
[Graphical view]
SUPFAMiSSF48726. SSF48726. 7 hits.
PROSITEiPS50835. IG_LIKE. 5 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9JJ08-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVSCWDTAVL PCALLGCLLL TGYCSGSKLK GPELSLKGTQ HVMQAGQTLF
60 70 80 90 100
LKCRGEAAHS WSLPTTVSQE DKKLSVTRSA CGRNNRQFCS TLTLNMAQAN
110 120 130 140 150
HTGLYSCRYL PKSTSKEKKM ESAIYIFVSD AGSPFIEMHS DIPKLVHMTE
160 170 180 190 200
GRELIIPCRV TSPNITVTLK KFPFDALTPD GQRIAWDSRR GFIIANATYK
210 220 230 240 250
EIGLLTCEAT VNGHLYQTSY LTHRQTNTIL DVQISPPSPV RFLRGQTLVL
260 270 280 290 300
NCTVTTDLNT RVQMSWNYPG KATKRASIRQ RIDQSNPHSN VFHSVLKINN
310 320 330 340 350
VESRDKGLYT CRVKSGSSFR TFNTSVHVYE KGFISVKHRK QQVQETIAGK
360 370 380 390 400
RSHRLSMKVK AFPSPEVVWL KDGVPATEKS ARYSVHGYSL IIKDVTAEDA
410 420 430 440 450
GDYTILLGIK QSKLFRNLTA TLIVNVKPQI YEKSVSSLPS PPLYPLGSRQ
460 470 480 490 500
VLTCTVYGIP QPTIKWLWHP CHYNHSKERN DFCFGSEESF ILDSSSNIGN
510 520 530 540 550
RIEGITQRMM VIEGTNKTVS TLVVADSRTP GSYSCKAFNK IGTVERDIRF
560 570 580 590 600
YVTDVPNGFH VSLEKIPTEG EDLKLSCVVS KFLYRDITWI LLRTVNNRTM
610 620 630 640 650
HHSISKQKMA TTQDYSITLN LVIKNVSLED SGTYACRARN IYTGEEILRK
660 670 680
TEVLVRGEHC SKKAIFSRIS EFKSRRSGCA TQSNVKH
Length:687
Mass (Da):77,114
Last modified:October 1, 2000 - v1
Checksum:i15C1F510928528A8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF157595 mRNA. Translation: AAF80356.1.
UniGeneiRn.10239.
Rn.204387.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF157595 mRNA. Translation: AAF80356.1.
UniGeneiRn.10239.
Rn.204387.

3D structure databases

ProteinModelPortaliQ9JJ08.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000001248.

Proteomic databases

PaxDbiQ9JJ08.
PRIDEiQ9JJ08.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

RGDi2621. Flt1.

Phylogenomic databases

eggNOGiKOG0200. Eukaryota.
COG0515. LUCA.
HOVERGENiHBG053003.

Family and domain databases

Gene3Di2.60.40.10. 6 hits.
InterProiIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR013098. Ig_I-set.
IPR003599. Ig_sub.
IPR003598. Ig_sub2.
IPR009135. VEGFR1_rcpt.
[Graphical view]
PfamiPF07679. I-set. 1 hit.
[Graphical view]
PRINTSiPR01833. VEGFRECEPTR1.
SMARTiSM00409. IG. 6 hits.
SM00408. IGc2. 4 hits.
[Graphical view]
SUPFAMiSSF48726. SSF48726. 7 hits.
PROSITEiPS50835. IG_LIKE. 5 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ9JJ08_RAT
AccessioniPrimary (citable) accession number: Q9JJ08
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: October 5, 2016
This is version 94 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.