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Protein
Submitted name:

Cadherin-10

Gene

Cdh10

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. calcium ion binding Source: InterPro

GO - Biological processi

  1. homophilic cell adhesion via plasma membrane adhesion molecules Source: InterPro
  2. single organismal cell-cell adhesion Source: RGD
Complete GO annotation...

Enzyme and pathway databases

ReactomeiREACT_312354. Adherens junctions interactions.

Names & Taxonomyi

Protein namesi
Submitted name:
Cadherin-10Imported
Gene namesi
Name:Cdh10Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi619741. Cdh10.

Subcellular locationi

GO - Cellular componenti

  1. membrane Source: InterPro
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiQ9JIW3.

Expressioni

Gene expression databases

ExpressionAtlasiQ9JIW3. baseline and differential.
GenevestigatoriQ9JIW3.

Structurei

3D structure databases

ProteinModelPortaliQ9JIW3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Family and domain databases

Gene3Di4.10.900.10. 1 hit.
InterProiIPR000233. Cadherin_cytoplasmic-dom.
IPR027397. Catenin_binding_dom.
[Graphical view]
PfamiPF01049. Cadherin_C. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q9JIW3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
TQAFDIGTLR NPAAIEEKKL RRDIIPETLF IPRRTPTAPD NTDVRDFINE
60
RLKEHDLDPT A
Length:61
Mass (Da):7,043
Last modified:October 1, 2000 - v1
Checksum:iC0D5A6B804C21308
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported
Non-terminal residuei61 – 611Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF177676 mRNA. Translation: AAF87051.1.
UniGeneiRn.83592.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF177676 mRNA. Translation: AAF87051.1.
UniGeneiRn.83592.

3D structure databases

ProteinModelPortaliQ9JIW3.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiQ9JIW3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

RGDi619741. Cdh10.

Enzyme and pathway databases

ReactomeiREACT_312354. Adherens junctions interactions.

Gene expression databases

ExpressionAtlasiQ9JIW3. baseline and differential.
GenevestigatoriQ9JIW3.

Family and domain databases

Gene3Di4.10.900.10. 1 hit.
InterProiIPR000233. Cadherin_cytoplasmic-dom.
IPR027397. Catenin_binding_dom.
[Graphical view]
PfamiPF01049. Cadherin_C. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Multiple cadherin superfamily members with unique expression profiles are produced in rat testis."
    Johnson K.J., Patel S.R., Boekelheide K.
    Endocrinology 141:675-683(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Fischer344Imported.
    Tissue: TestisImported.

Entry informationi

Entry nameiQ9JIW3_RAT
AccessioniPrimary (citable) accession number: Q9JIW3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: April 1, 2015
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.