Q9JIW3 (Q9JIW3_RAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Cadherin-10 EMBL AAF87051.1

Gene names

Name:

Cdh10 RGD 619741

Organism

Rattus norvegicus (Rat) EMBL AAF87051.1

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	61 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological_process	cell-cell adhesion Traceable author statement Ref.1. Source: RGD homophilic cell adhesion Inferred from electronic annotation. Source: InterPro
Cellular_component	membrane Inferred from electronic annotation. Source: InterPro
Molecular_function	calcium ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL AAF87051.1
	Non-terminal residue	61	1	EMBL AAF87051.1

Sequences

	Sequence		Length	Mass (Da)
	Q9JIW3 [UniParc]. Last modified October 1, 2000. Version 1. Checksum: C0D5A6B804C21308	FASTA	61	7,043
	10 20 30 40 50 60 TQAFDIGTLR NPAAIEEKKL RRDIIPETLF IPRRTPTAPD NTDVRDFINE RLKEHDLDPT A

References

[1]

"Multiple cadherin superfamily members with unique expression profiles are produced in rat testis." Johnson K.J., Patel S.R., Boekelheide K. Endocrinology 141:675-683(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Fischer344 EMBL AAF87051.1. Tissue: Testis EMBL AAF87051.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF177676 mRNA. Translation: AAF87051.1.
IPI	IPI00203530.
UniGene	Rn.83592.
3D structure databases
ProteinModelPortal	Q9JIW3.
ModBase	Search...
Protein-protein interaction databases
STRING	Q9JIW3.
Proteomic databases
PRIDE	Q9JIW3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Organism-specific databases
RGD	619741. Cdh10.
Phylogenomic databases
InParanoid	Q9JIW3.
Gene expression databases
ArrayExpress	Q9JIW3.
Genevestigator	Q9JIW3.
Family and domain databases
InterPro	IPR000233. Cadherin_cytoplasmic-dom. [Graphical view]
Pfam	PF01049. Cadherin_C. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9JIW3_RAT

Accession

Primary (citable) accession number: Q9JIW3

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2000
Last sequence update:	October 1, 2000
Last modified:	April 3, 2013
This is version 46 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)