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Q9JIG7

- CCD22_MOUSE

UniProt

Q9JIG7 - CCD22_MOUSE

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Protein

Coiled-coil domain-containing protein 22

Gene

Ccdc22

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Coiled-coil domain-containing protein 22
Gene namesi
Name:Ccdc22
Synonyms:DXImx40e
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome X

Organism-specific databases

MGIiMGI:1859608. Ccdc22.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 627627Coiled-coil domain-containing protein 22PRO_0000076200Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei410 – 4101PhosphoserineBy similarity

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiQ9JIG7.
PaxDbiQ9JIG7.
PRIDEiQ9JIG7.

PTM databases

PhosphoSiteiQ9JIG7.

Expressioni

Gene expression databases

BgeeiQ9JIG7.
CleanExiMM_CCDC22.
GenevestigatoriQ9JIG7.

Interactioni

Subunit structurei

Interacts with CPNE1 and CPNE4.1 Publication

Protein-protein interaction databases

BioGridi207701. 2 interactions.
IntActiQ9JIG7. 6 interactions.
MINTiMINT-1865494.

Structurei

3D structure databases

ProteinModelPortaliQ9JIG7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili448 – 53588Sequence AnalysisAdd
BLAST

Sequence similaritiesi

Belongs to the CCDC22 family.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiNOG253647.
GeneTreeiENSGT00390000003809.
HOGENOMiHOG000039965.
HOVERGENiHBG053063.
InParanoidiQ9JIG7.
OMAiECRQSEL.
OrthoDBiEOG7QNVKR.
PhylomeDBiQ9JIG7.
TreeFamiTF325575.

Family and domain databases

InterProiIPR008530. DUF812.
[Graphical view]
PANTHERiPTHR15668. PTHR15668. 1 hit.
PfamiPF05667. DUF812. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9JIG7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MEEADRILIH SLRQAGTAVP PEVQTLRAFT TELVVEAVVR CLRVINPDVG
60 70 80 90 100
SGLSHLLPPA MSARFRLAMS LAQACMDLGY PLELGYQNFL YPSEPDLRDL
110 120 130 140 150
LLFLAERLPS DASEDADQPA GDSAIFLRAI GSQIRDQLAL PWVPPLLRTP
160 170 180 190 200
KVQRLQGSAL QQPFHSSRLV LPELNSSGEL WEFQASPLLL PAPTQVPQLQ
210 220 230 240 250
GRAASLLEHH ASQLCQHVNR DCPGDEDRVR WASRVPSQED SRAPQQRLHK
260 270 280 290 300
QLIEHLRQSW GPLGAPTQVR DLGEMLQTWG ARAMTGVPKG SRFTHSEKFT
310 320 330 340 350
FHLEPQVQAA QVADVPATSQ RLEQDTRAAQ EQELESLREQ LASVNHNIEE
360 370 380 390 400
VEADMKTLGI NLVQVETECR QSELSVAEQE QALRLKSRTV ELLPDGAANL
410 420 430 440 450
AKLQLVVESS AQRLIHLASQ WEKHRVPLLA EYRHLRRLQD CRELESSRRL
460 470 480 490 500
AEIQELHHSV RAAAEEARRK EEVYKQLVSE LETLPKDVSR LAYTQRILEI
510 520 530 540 550
VGNIRKQKEE ITKILSDTKE LQKEINSLSG KLDRTFAVTD ELVFKDAKKD
560 570 580 590 600
DAVRKAYKYL AALHENCSQL IQTIEDTGTI MREVRDLEEQ IETEMGKKTL
610 620
SNLEKICEDY RALRQENAGL LGRVREA
Length:627
Mass (Da):70,844
Last modified:October 1, 2000 - v1
Checksum:i3710732B4CD90A2E
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti117 – 1171D → N in BAC30390. (PubMed:16141072)Curated
Sequence conflicti529 – 5291S → F in BAC30390. (PubMed:16141072)Curated

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF229637 mRNA. Translation: AAF66951.1.
AK010536 mRNA. Translation: BAB27013.1.
AK039573 mRNA. Translation: BAC30390.1.
AL672231 Genomic DNA. Translation: CAM25951.1.
BC011195 mRNA. Translation: AAH11195.1.
CCDSiCCDS29966.1.
RefSeqiNP_613069.3. NM_138603.3.
UniGeneiMm.288192.

Genome annotation databases

EnsembliENSMUST00000033483; ENSMUSP00000033483; ENSMUSG00000031143.
GeneIDi54638.
KEGGimmu:54638.
UCSCiuc009sln.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF229637 mRNA. Translation: AAF66951.1 .
AK010536 mRNA. Translation: BAB27013.1 .
AK039573 mRNA. Translation: BAC30390.1 .
AL672231 Genomic DNA. Translation: CAM25951.1 .
BC011195 mRNA. Translation: AAH11195.1 .
CCDSi CCDS29966.1.
RefSeqi NP_613069.3. NM_138603.3.
UniGenei Mm.288192.

3D structure databases

ProteinModelPortali Q9JIG7.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 207701. 2 interactions.
IntActi Q9JIG7. 6 interactions.
MINTi MINT-1865494.

PTM databases

PhosphoSitei Q9JIG7.

Proteomic databases

MaxQBi Q9JIG7.
PaxDbi Q9JIG7.
PRIDEi Q9JIG7.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000033483 ; ENSMUSP00000033483 ; ENSMUSG00000031143 .
GeneIDi 54638.
KEGGi mmu:54638.
UCSCi uc009sln.1. mouse.

Organism-specific databases

CTDi 28952.
MGIi MGI:1859608. Ccdc22.

Phylogenomic databases

eggNOGi NOG253647.
GeneTreei ENSGT00390000003809.
HOGENOMi HOG000039965.
HOVERGENi HBG053063.
InParanoidi Q9JIG7.
OMAi ECRQSEL.
OrthoDBi EOG7QNVKR.
PhylomeDBi Q9JIG7.
TreeFami TF325575.

Miscellaneous databases

ChiTaRSi CCDC22. mouse.
NextBioi 311476.
PROi Q9JIG7.
SOURCEi Search...

Gene expression databases

Bgeei Q9JIG7.
CleanExi MM_CCDC22.
Genevestigatori Q9JIG7.

Family and domain databases

InterProi IPR008530. DUF812.
[Graphical view ]
PANTHERi PTHR15668. PTHR15668. 1 hit.
Pfami PF05667. DUF812. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "A transcript map of a 2-Mb BAC contig in the proximal portion of the mouse X chromosome and regional mapping of the scurfy mutation."
    Means G.D., Toy D.Y., Baum P.R., Derry J.M.J.
    Genomics 65:213-223(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
  2. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J.
    Tissue: Spinal cord.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6J.
  4. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: FVB/N.
    Tissue: Salivary gland.
  5. "Identification of targets for calcium signaling through the copine family of proteins. Characterization of a coiled-coil copine-binding motif."
    Tomsig J.L., Snyder S.L., Creutz C.E.
    J. Biol. Chem. 278:10048-10054(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: INTERACTION WITH CPNE1 AND CPNE4.

Entry informationi

Entry nameiCCD22_MOUSE
AccessioniPrimary (citable) accession number: Q9JIG7
Secondary accession number(s): B1AVA1, Q8BYH4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 6, 2005
Last sequence update: October 1, 2000
Last modified: October 29, 2014
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3