Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q9JI18

- LRP1B_MOUSE

UniProt

Q9JI18 - LRP1B_MOUSE

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Low-density lipoprotein receptor-related protein 1B

Gene

Lrp1b

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 5 out of 5- Experimental evidence at protein leveli

Functioni

Potential cell surface proteins that bind and internalize ligands in the process of receptor-mediated endocytosis.

GO - Molecular functioni

  1. calcium ion binding Source: InterPro
  2. low-density lipoprotein particle receptor binding Source: MGI
  3. low-density lipoprotein receptor activity Source: MGI

GO - Biological processi

  1. receptor-mediated endocytosis Source: GOC
Complete GO annotation...

Keywords - Molecular functioni

Receptor

Keywords - Biological processi

Endocytosis

Keywords - Ligandi

Calcium

Names & Taxonomyi

Protein namesi
Recommended name:
Low-density lipoprotein receptor-related protein 1B
Short name:
LRP-1B
Alternative name(s):
Low-density lipoprotein receptor-related protein-deleted in tumor
Short name:
LRP-DIT
Gene namesi
Name:Lrp1b
Synonyms:Lrpdit
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Unplaced

Organism-specific databases

MGIiMGI:2151136. Lrp1b.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini21 – 44444424ExtracellularSequence AnalysisAdd
BLAST
Transmembranei4445 – 446723HelicalSequence AnalysisAdd
BLAST
Topological domaini4468 – 4599132CytoplasmicSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. membrane Source: MGI
  3. receptor complex Source: MGI
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020Sequence AnalysisAdd
BLAST
Chaini21 – 45994579Low-density lipoprotein receptor-related protein 1BPRO_0000017320Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi32 ↔ 45By similarity
Disulfide bondi39 ↔ 58By similarity
Disulfide bondi52 ↔ 69By similarity
Disulfide bondi77 ↔ 90By similarity
Disulfide bondi84 ↔ 103By similarity
Disulfide bondi97 ↔ 113By similarity
Glycosylationi134 – 1341N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi159 ↔ 169By similarity
Disulfide bondi165 ↔ 178By similarity
Disulfide bondi180 ↔ 193By similarity
Glycosylationi190 – 1901N-linked (GlcNAc...)Sequence Analysis
Glycosylationi220 – 2201N-linked (GlcNAc...)Sequence Analysis
Glycosylationi313 – 3131N-linked (GlcNAc...)Sequence Analysis
Glycosylationi360 – 3601N-linked (GlcNAc...)Sequence Analysis
Glycosylationi443 – 4431N-linked (GlcNAc...)Sequence Analysis
Glycosylationi725 – 7251N-linked (GlcNAc...)Sequence Analysis
Glycosylationi758 – 7581N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi798 ↔ 809By similarity
Disulfide bondi805 ↔ 818By similarity
Disulfide bondi820 ↔ 833By similarity
Glycosylationi829 – 8291N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi845 ↔ 857By similarity
Disulfide bondi852 ↔ 870By similarity
Disulfide bondi864 ↔ 881By similarity
Glycosylationi883 – 8831N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi886 ↔ 898By similarity
Disulfide bondi893 ↔ 911By similarity
Disulfide bondi905 ↔ 922By similarity
Glycosylationi919 – 9191N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi927 ↔ 939By similarity
Disulfide bondi934 ↔ 952By similarity
Disulfide bondi946 ↔ 962By similarity
Disulfide bondi967 ↔ 980By similarity
Disulfide bondi975 ↔ 993By similarity
Disulfide bondi987 ↔ 1002By similarity
Disulfide bondi1006 ↔ 1018By similarity
Disulfide bondi1013 ↔ 1031By similarity
Disulfide bondi1025 ↔ 1042By similarity
Glycosylationi1041 – 10411N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi1053 ↔ 1066By similarity
Disulfide bondi1060 ↔ 1079By similarity
Disulfide bondi1073 ↔ 1088By similarity
Glycosylationi1089 – 10891N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi1095 ↔ 1109By similarity
Disulfide bondi1103 ↔ 1122By similarity
Disulfide bondi1116 ↔ 1131By similarity
Disulfide bondi1136 ↔ 1150By similarity
Disulfide bondi1143 ↔ 1163By similarity
Glycosylationi1145 – 11451N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi1157 ↔ 1173By similarity
Disulfide bondi1176 ↔ 1187By similarity
Disulfide bondi1183 ↔ 1197By similarity
Disulfide bondi1199 ↔ 1212By similarity
Glycosylationi1209 – 12091N-linked (GlcNAc...)Sequence Analysis
Glycosylationi1298 – 12981N-linked (GlcNAc...)Sequence Analysis
Glycosylationi1502 – 15021N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi1531 ↔ 1544By similarity
Disulfide bondi1540 ↔ 1554By similarity
Glycosylationi1549 – 15491N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi1556 ↔ 1569By similarity
Glycosylationi1636 – 16361N-linked (GlcNAc...)Sequence Analysis
Glycosylationi1754 – 17541N-linked (GlcNAc...)Sequence Analysis
Glycosylationi1816 – 18161N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi1838 ↔ 1849By similarity
Disulfide bondi1845 ↔ 1859By similarity
Disulfide bondi1861 ↔ 1874By similarity
Glycosylationi1921 – 19211N-linked (GlcNAc...)Sequence Analysis
Glycosylationi1983 – 19831N-linked (GlcNAc...)Sequence Analysis
Glycosylationi2105 – 21051N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi2147 ↔ 2158By similarity
Disulfide bondi2154 ↔ 2168By similarity
Disulfide bondi2170 ↔ 2182By similarity
Glycosylationi2458 – 24581N-linked (GlcNAc...)Sequence Analysis
Glycosylationi2488 – 24881N-linked (GlcNAc...)Sequence Analysis
Glycosylationi2507 – 25071N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi2510 ↔ 2523By similarity
Disulfide bondi2518 ↔ 2536By similarity
Disulfide bondi2530 ↔ 2547By similarity
Glycosylationi2549 – 25491N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi2552 ↔ 2564By similarity
Disulfide bondi2559 ↔ 2577By similarity
Disulfide bondi2571 ↔ 2586By similarity
Disulfide bondi2591 ↔ 2603By similarity
Disulfide bondi2598 ↔ 2616By similarity
Disulfide bondi2610 ↔ 2625By similarity
Glycosylationi2626 – 26261N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi2630 ↔ 2652By similarity
Disulfide bondi2646 ↔ 2665By similarity
Glycosylationi2647 – 26471N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi2659 ↔ 2674By similarity
Disulfide bondi2682 ↔ 2694By similarity
Disulfide bondi2689 ↔ 2707By similarity
Disulfide bondi2701 ↔ 2716By similarity
Disulfide bondi2720 ↔ 2732By similarity
Disulfide bondi2727 ↔ 2745By similarity
Disulfide bondi2739 ↔ 2756By similarity
Disulfide bondi2761 ↔ 2774By similarity
Disulfide bondi2768 ↔ 2787By similarity
Disulfide bondi2781 ↔ 2799By similarity
Glycosylationi2802 – 28021N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi2805 ↔ 2817By similarity
Disulfide bondi2812 ↔ 2830By similarity
Disulfide bondi2824 ↔ 2840By similarity
Disulfide bondi2845 ↔ 2857By similarity
Disulfide bondi2852 ↔ 2871By similarity
Disulfide bondi2865 ↔ 2884By similarity
Disulfide bondi2891 ↔ 2903By similarity
Glycosylationi2892 – 28921N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi2898 ↔ 2916By similarity
Disulfide bondi2910 ↔ 2925By similarity
Disulfide bondi2930 ↔ 2942By similarity
Disulfide bondi2938 ↔ 2951By similarity
Disulfide bondi2953 ↔ 2966By similarity
Disulfide bondi2972 ↔ 2982By similarity
Disulfide bondi2978 ↔ 2991By similarity
Disulfide bondi2993 ↔ 3007By similarity
Glycosylationi3034 – 30341N-linked (GlcNAc...)Sequence Analysis
Glycosylationi3066 – 30661N-linked (GlcNAc...)Sequence Analysis
Glycosylationi3076 – 30761N-linked (GlcNAc...)Sequence Analysis
Glycosylationi3164 – 31641N-linked (GlcNAc...)Sequence Analysis
Glycosylationi3310 – 33101N-linked (GlcNAc...)Sequence Analysis
Glycosylationi3316 – 33161N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi3317 ↔ 3329By similarity
Disulfide bondi3324 ↔ 3342By similarity
Disulfide bondi3336 ↔ 3352By similarity
Disulfide bondi3357 ↔ 3369By similarity
Disulfide bondi3364 ↔ 3382By similarity
Disulfide bondi3376 ↔ 3391By similarity
Disulfide bondi3396 ↔ 3409By similarity
Disulfide bondi3403 ↔ 3422By similarity
Disulfide bondi3416 ↔ 3431By similarity
Disulfide bondi3436 ↔ 3449By similarity
Disulfide bondi3443 ↔ 3462By similarity
Disulfide bondi3456 ↔ 3471By similarity
Disulfide bondi3476 ↔ 3488By similarity
Disulfide bondi3483 ↔ 3501By similarity
Disulfide bondi3495 ↔ 3510By similarity
Disulfide bondi3515 ↔ 3527By similarity
Disulfide bondi3522 ↔ 3540By similarity
Disulfide bondi3534 ↔ 3549By similarity
Disulfide bondi3553 ↔ 3565By similarity
Disulfide bondi3560 ↔ 3578By similarity
Disulfide bondi3572 ↔ 3587By similarity
Disulfide bondi3594 ↔ 3606By similarity
Disulfide bondi3601 ↔ 3619By similarity
Disulfide bondi3613 ↔ 3628By similarity
Disulfide bondi3632 ↔ 3645By similarity
Disulfide bondi3639 ↔ 3658By similarity
Disulfide bondi3652 ↔ 3667By similarity
Disulfide bondi3674 ↔ 3686By similarity
Disulfide bondi3681 ↔ 3699By similarity
Glycosylationi3682 – 36821N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi3693 ↔ 3710By similarity
Disulfide bondi3715 ↔ 3729By similarity
Disulfide bondi3723 ↔ 3742By similarity
Disulfide bondi3736 ↔ 3751By similarity
Disulfide bondi3762 ↔ 3774By similarity
Disulfide bondi3769 ↔ 3787By similarity
Disulfide bondi3781 ↔ 3796By similarity
Disulfide bondi3805 ↔ 3818By similarity
Disulfide bondi3812 ↔ 3827By similarity
Disulfide bondi3829 ↔ 3842By similarity
Disulfide bondi3848 ↔ 3858By similarity
Disulfide bondi3854 ↔ 3867By similarity
Glycosylationi3877 – 38771N-linked (GlcNAc...)Sequence Analysis
Glycosylationi3894 – 38941N-linked (GlcNAc...)Sequence Analysis
Glycosylationi3906 – 39061N-linked (GlcNAc...)Sequence Analysis
Glycosylationi4017 – 40171N-linked (GlcNAc...)Sequence Analysis
Glycosylationi4204 – 42041N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi4217 ↔ 4227By similarity
Disulfide bondi4221 ↔ 4237By similarity
Disulfide bondi4239 ↔ 4248By similarity
Disulfide bondi4253 ↔ 4263By similarity
Disulfide bondi4257 ↔ 4273By similarity
Disulfide bondi4275 ↔ 4284By similarity
Disulfide bondi4289 ↔ 4299By similarity
Disulfide bondi4293 ↔ 4309By similarity
Disulfide bondi4311 ↔ 4320By similarity
Disulfide bondi4325 ↔ 4335By similarity
Disulfide bondi4329 ↔ 4345By similarity
Disulfide bondi4347 ↔ 4356By similarity
Glycosylationi4381 – 43811N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi4394 ↔ 4404By similarity
Disulfide bondi4398 ↔ 4415By similarity
Disulfide bondi4417 ↔ 4426By similarity
Glycosylationi4420 – 44201N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PaxDbiQ9JI18.
PRIDEiQ9JI18.

PTM databases

PhosphoSiteiQ9JI18.

Expressioni

Gene expression databases

GenevestigatoriQ9JI18.

Interactioni

Subunit structurei

Binds LRPAP1, PLAU, PLAT and SERPINE1; binding is followed by internalization and degradation of the ligands.By similarity

Binary interactionsi

WithEntry#Exp.IntActNotes
Mapk8ip1Q9WVI9-13EBI-8294317,EBI-288461
Pick1Q80VC84EBI-8294317,EBI-8521477
Ranbp9P695662EBI-8294317,EBI-772305

Protein-protein interaction databases

IntActiQ9JI18. 7 interactions.
MINTiMINT-4998267.
STRINGi10090.ENSMUSP00000054275.

Structurei

3D structure databases

ProteinModelPortaliQ9JI18.
SMRiQ9JI18. Positions 32-111, 136-833, 845-4205, 4215-4357.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini31 – 7040LDL-receptor class A 1PROSITE-ProRule annotationAdd
BLAST
Domaini76 – 11439LDL-receptor class A 2PROSITE-ProRule annotationAdd
BLAST
Domaini116 – 15439EGF-like 1PROSITE-ProRule annotationAdd
BLAST
Domaini155 – 19440EGF-like 2; calcium-bindingPROSITE-ProRule annotationAdd
BLAST
Repeati295 – 33743LDL-receptor class B 1Add
BLAST
Repeati338 – 38144LDL-receptor class B 2Add
BLAST
Repeati382 – 42544LDL-receptor class B 3Add
BLAST
Domaini471 – 51747EGF-like 3PROSITE-ProRule annotationAdd
BLAST
Repeati568 – 61043LDL-receptor class B 4Add
BLAST
Repeati611 – 65646LDL-receptor class B 5Add
BLAST
Repeati657 – 70650LDL-receptor class B 6Add
BLAST
Repeati707 – 75044LDL-receptor class B 7Add
BLAST
Domaini794 – 83441EGF-like 4PROSITE-ProRule annotationAdd
BLAST
Domaini844 – 88239LDL-receptor class A 3PROSITE-ProRule annotationAdd
BLAST
Domaini885 – 92339LDL-receptor class A 4PROSITE-ProRule annotationAdd
BLAST
Domaini926 – 96338LDL-receptor class A 5PROSITE-ProRule annotationAdd
BLAST
Domaini966 – 100338LDL-receptor class A 6PROSITE-ProRule annotationAdd
BLAST
Domaini1005 – 104339LDL-receptor class A 7PROSITE-ProRule annotationAdd
BLAST
Domaini1052 – 108938LDL-receptor class A 8PROSITE-ProRule annotationAdd
BLAST
Domaini1094 – 113239LDL-receptor class A 9PROSITE-ProRule annotationAdd
BLAST
Domaini1135 – 117440LDL-receptor class A 10PROSITE-ProRule annotationAdd
BLAST
Domaini1174 – 121340EGF-like 5PROSITE-ProRule annotationAdd
BLAST
Domaini1214 – 125340EGF-like 6PROSITE-ProRule annotationAdd
BLAST
Repeati1300 – 134647LDL-receptor class B 8Add
BLAST
Repeati1347 – 138943LDL-receptor class B 9Add
BLAST
Repeati1390 – 143647LDL-receptor class B 10Add
BLAST
Repeati1437 – 148044LDL-receptor class B 11Add
BLAST
Repeati1481 – 152242LDL-receptor class B 12Add
BLAST
Domaini1527 – 157044EGF-like 7PROSITE-ProRule annotationAdd
BLAST
Repeati1618 – 166043LDL-receptor class B 13Add
BLAST
Repeati1661 – 170444LDL-receptor class B 14Add
BLAST
Repeati1705 – 174440LDL-receptor class B 15Add
BLAST
Repeati1745 – 178743LDL-receptor class B 16Add
BLAST
Domaini1834 – 187542EGF-like 8PROSITE-ProRule annotationAdd
BLAST
Repeati1922 – 196443LDL-receptor class B 17Add
BLAST
Repeati1965 – 200743LDL-receptor class B 28Add
BLAST
Repeati2008 – 205144LDL-receptor class B 19Add
BLAST
Repeati2052 – 209544LDL-receptor class B 20Add
BLAST
Domaini2143 – 218341EGF-like 9PROSITE-ProRule annotationAdd
BLAST
Repeati2239 – 228042LDL-receptor class B 21Add
BLAST
Repeati2281 – 232949LDL-receptor class B 22Add
BLAST
Repeati2330 – 237445LDL-receptor class B 23Add
BLAST
Repeati2375 – 241642LDL-receptor class B 24Add
BLAST
Repeati2417 – 245943LDL-receptor class B 25Add
BLAST
Domaini2464 – 250441EGF-like 10PROSITE-ProRule annotationAdd
BLAST
Domaini2509 – 254840LDL-receptor class A 11PROSITE-ProRule annotationAdd
BLAST
Domaini2551 – 258737LDL-receptor class A 12PROSITE-ProRule annotationAdd
BLAST
Domaini2590 – 262637LDL-receptor class A 13PROSITE-ProRule annotationAdd
BLAST
Domaini2629 – 267547LDL-receptor class A 14PROSITE-ProRule annotationAdd
BLAST
Domaini2681 – 271737LDL-receptor class A 15PROSITE-ProRule annotationAdd
BLAST
Domaini2719 – 275739LDL-receptor class A 16PROSITE-ProRule annotationAdd
BLAST
Domaini2760 – 280041LDL-receptor class A 17PROSITE-ProRule annotationAdd
BLAST
Domaini2804 – 284138LDL-receptor class A 18PROSITE-ProRule annotationAdd
BLAST
Domaini2844 – 288542LDL-receptor class A 19PROSITE-ProRule annotationAdd
BLAST
Domaini2890 – 292637LDL-receptor class A 20PROSITE-ProRule annotationAdd
BLAST
Domaini2927 – 296741EGF-like 11PROSITE-ProRule annotationAdd
BLAST
Domaini2968 – 300841EGF-like 12; calcium-bindingPROSITE-ProRule annotationAdd
BLAST
Repeati3055 – 309844LDL-receptor class B 26Add
BLAST
Repeati3099 – 314143LDL-receptor class B 27Add
BLAST
Repeati3142 – 318544LDL-receptor class B 28Add
BLAST
Repeati3186 – 322439LDL-receptor class B 29Add
BLAST
Repeati3225 – 326844LDL-receptor class B 30Add
BLAST
Domaini3273 – 331442EGF-like 13PROSITE-ProRule annotationAdd
BLAST
Domaini3316 – 335338LDL-receptor class A 21PROSITE-ProRule annotationAdd
BLAST
Domaini3356 – 339237LDL-receptor class A 22PROSITE-ProRule annotationAdd
BLAST
Domaini3395 – 343238LDL-receptor class A 23PROSITE-ProRule annotationAdd
BLAST
Domaini3435 – 347238LDL-receptor class A 24PROSITE-ProRule annotationAdd
BLAST
Domaini3475 – 351137LDL-receptor class A 25PROSITE-ProRule annotationAdd
BLAST
Domaini3514 – 355037LDL-receptor class A 26PROSITE-ProRule annotationAdd
BLAST
Domaini3552 – 358837LDL-receptor class A 27PROSITE-ProRule annotationAdd
BLAST
Domaini3593 – 362937LDL-receptor class A 28PROSITE-ProRule annotationAdd
BLAST
Domaini3631 – 366838LDL-receptor class A 29PROSITE-ProRule annotationAdd
BLAST
Domaini3673 – 371139LDL-receptor class A 30PROSITE-ProRule annotationAdd
BLAST
Domaini3714 – 375239LDL-receptor class A 31PROSITE-ProRule annotationAdd
BLAST
Domaini3761 – 379737LDL-receptor class A 32PROSITE-ProRule annotationAdd
BLAST
Domaini3801 – 384343EGF-like 14PROSITE-ProRule annotationAdd
BLAST
Domaini3844 – 388138EGF-like 15PROSITE-ProRule annotationAdd
BLAST
Repeati3933 – 398048LDL-receptor class B 31Add
BLAST
Repeati3981 – 403858LDL-receptor class B 32Add
BLAST
Repeati4039 – 408244LDL-receptor class B 33Add
BLAST
Repeati4083 – 412745LDL-receptor class B 34Add
BLAST
Domaini4171 – 420838EGF-like 16PROSITE-ProRule annotationAdd
BLAST
Domaini4213 – 424937EGF-like 17PROSITE-ProRule annotationAdd
BLAST
Domaini4249 – 428537EGF-like 18PROSITE-ProRule annotationAdd
BLAST
Domaini4285 – 432137EGF-like 19PROSITE-ProRule annotationAdd
BLAST
Domaini4321 – 435737EGF-like 20PROSITE-ProRule annotationAdd
BLAST
Domaini4357 – 439236EGF-like 21PROSITE-ProRule annotationAdd
BLAST
Domaini4390 – 442738EGF-like 22PROSITE-ProRule annotationAdd
BLAST

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi4492 – 44954Endocytosis signalSequence Analysis
Motifi4559 – 45624Endocytosis signalSequence Analysis

Sequence similaritiesi

Belongs to the LDLR family.Curated
Contains 22 EGF-like domains.PROSITE-ProRule annotation
Contains 32 LDL-receptor class A domains.PROSITE-ProRule annotation
Contains 34 LDL-receptor class B repeats.PROSITE-ProRule annotation

Keywords - Domaini

EGF-like domain, Repeat, Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG235850.
HOVERGENiHBG006292.
InParanoidiQ9JI18.

Family and domain databases

Gene3Di2.120.10.30. 8 hits.
4.10.400.10. 31 hits.
InterProiIPR011042. 6-blade_b-propeller_TolB-like.
IPR026823. cEGF.
IPR000742. EG-like_dom.
IPR001881. EGF-like_Ca-bd_dom.
IPR013032. EGF-like_CS.
IPR000152. EGF-type_Asp/Asn_hydroxyl_site.
IPR018097. EGF_Ca-bd_CS.
IPR009030. Growth_fac_rcpt_N_dom.
IPR023415. LDLR_class-A_CS.
IPR000033. LDLR_classB_rpt.
IPR002172. LDrepeatLR_classA_rpt.
[Graphical view]
PfamiPF12662. cEGF. 1 hit.
PF00008. EGF. 1 hit.
PF07645. EGF_CA. 2 hits.
PF00057. Ldl_recept_a. 30 hits.
PF00058. Ldl_recept_b. 11 hits.
[Graphical view]
PRINTSiPR00261. LDLRECEPTOR.
SMARTiSM00181. EGF. 16 hits.
SM00179. EGF_CA. 4 hits.
SM00192. LDLa. 32 hits.
SM00135. LY. 36 hits.
[Graphical view]
SUPFAMiSSF57184. SSF57184. 6 hits.
SSF57424. SSF57424. 32 hits.
PROSITEiPS00010. ASX_HYDROXYL. 4 hits.
PS00022. EGF_1. 5 hits.
PS01186. EGF_2. 9 hits.
PS50026. EGF_3. 9 hits.
PS01187. EGF_CA. 3 hits.
PS01209. LDLRA_1. 27 hits.
PS50068. LDLRA_2. 32 hits.
PS51120. LDLRB. 36 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9JI18-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSQLLLAILT LSGLLPNAEV LIVGANQDQH LCDPGEFLCH DHVTCVSQSW
60 70 80 90 100
LCDGDPDCPD QSDESLDTCP EEVEIKCPLN HIACHGSSAC VHLSKLCNGV
110 120 130 140 150
VDCPDGFDEG GHCQELLPSC QQLNCQFKCA MVRNATRCYC EDGFEVAEDG
160 170 180 190 200
RSCKDQDECS IYGICSQTCK NTYGSYACSC VEGYIMQSDN RSCKVKHEPT
210 220 230 240 250
DKAPMLLISS LETIELFYIN GSKMTTLSSA NRNEIHTLDF IYSEEMICWI
260 270 280 290 300
ESRESSNQLK CGQITKAGRL TDQRIINSLQ SFQNVEQMAF DWLTRNIYFV
310 320 330 340 350
DHVSDRIFVC NFNGSVCVTL IESELHNPKA IAADPIAGKL FFTDYGNVPK
360 370 380 390 400
IERCDLDGMN RTRIVYSKAE QPSALALDLV NRLVYWVDLY LDYVGVVDYQ
410 420 430 440 450
GKNRHTIVQG RQVKHLYGIT VFEDYLYATS SDNFNIIRIN RFNGTDIHSI
460 470 480 490 500
IKMESARGIR TYQKRTQPTV RSHACEVDAY GMPGGCSHIC LLSSSYKTRT
510 520 530 540 550
CRCRTGFNMG SDGRSCKRPK NELFLFYGKG RPGIVRGMDL NTKIADECMI
560 570 580 590 600
PIENLVNPRA LDFHAEANYI YFADTTSFLI GRQKIDGTER ETILKDDLDN
610 620 630 640 650
VEGIAVDWIG NNLYWTNDGH RKTINVARLE KASQSRKTLL EGGMSHPRAI
660 670 680 690 700
VVDPVNGWMY WTDWKEDKID DSVGRIEKAW MDGVNRQVFV TSKMLWPNGL
710 720 730 740 750
TLDFHTSTLY WCDAYYDHIE KVFLNGTHRK VVYSGKELNH PFGLSHHGNY
760 770 780 790 800
VFWTDYMNGS IFQLDLMTNE VTLLRHERAP LFGLQIYDPR KQQGDNMCRI
810 820 830 840 850
NNGGCGTLCL AIPAGRVCAC ADNQLLDENG TTCTFNPEEI RFHICKPGEF
860 870 880 890 900
RCKNKHCIQA RWKCDGDDDC LDGSDEDSVT CFNHSCPDDQ FKCQNNRCIP
910 920 930 940 950
KRWLCDGAND CGSNEDESNQ TCTARTCQAD QFSCGNGRCI PTAWLCDRED
960 970 980 990 1000
DCGDQTDEVA SCEFPTCEPL TQFICKSGRC ISNKWHCDTD DDCGDRSDEV
1010 1020 1030 1040 1050
GCVHSCLDDQ FRCSSGRCIP GHWACDGDND CGDFSDETHI NCTKEEARSP
1060 1070 1080 1090 1100
AGCIGNEFQC RPDGNCIPDL WRCDGEKDCE DGSDEKGCNG TIRLCDHKTK
1110 1120 1130 1140 1150
FSCRSTGRCI NNAWVCDGDV DCEDQSDEED CDSFLCGPPK YPCANDTSVC
1160 1170 1180 1190 1200
LQPEKLCNGR KDCPDGSDEG DLCDECSLNN GGCSNHCSVV PGRGIVCSCP
1210 1220 1230 1240 1250
EGHQLKKDNR TCEIVDYCAS HLRCSQVCEQ QKHMVKCSCY EGWALGTDGE
1260 1270 1280 1290 1300
SCTSVDSFEA FIIFSIRHEI RRIDLHKGDY SLLVPGLRNT IALDFHFNQS
1310 1320 1330 1340 1350
LLYWTDVVED RIYRGKLSES GGVSAIEVVV EHGLATPEGL TVDWIAGNIY
1360 1370 1380 1390 1400
WIDSNLDQIE VSKLDGSLRA TLIAGAMEHP RAIALDPRYG ILFWTDWDAN
1410 1420 1430 1440 1450
FPRIESASMS GAGRKTIYKD MKTGAWPNGL TVDHFERRIV WTDARSDAIY
1460 1470 1480 1490 1500
SAFYDGTNMI EIIRGHEYLS HPFAVSLYGS EVYWTDWRTN TLAKANKWTG
1510 1520 1530 1540 1550
QNVSVIQKTS AQPFDLQIYH PSRQPQAPNP CAANEGRGPC SHLCLINHNR
1560 1570 1580 1590 1600
SAACACPHLM KLSSDKKTCY EMKKFLLYAR RSEIRGVDID NPYVNFITAF
1610 1620 1630 1640 1650
TVPDIDDVAV IDFDASEERL YWTDIKTQTI TRAFINGTGL ETVISRDIQS
1660 1670 1680 1690 1700
IRGLAVDWVS RNLYWISSEF DETQINVARL DGSLKTSIIH GIDKPQCLAA
1710 1720 1730 1740 1750
HPVRGKLYWT DGNTINMANM DGSNSKILFQ NQKEPVGLSI DYVENKLYWI
1760 1770 1780 1790 1800
SSGNGTINRC NLDGGNLEVI ESMKEELTKA TALTIMDKKL WWADQNLAQL
1810 1820 1830 1840 1850
GTCNKRDGRN PSILRNKTSG VVHMKVYDKE AQQGSNSCQV NNGGCSQLCL
1860 1870 1880 1890 1900
PTSETTRTCM CTVGYYLQKN RMSCQGIESF LMYSVHEGIR GIPLEPRDKV
1910 1920 1930 1940 1950
DALMPISGAA FAVGIDFHAE NDTIYWTDMG LNKISRAKRD QTWKEDVVTN
1960 1970 1980 1990 2000
GLGRVEGIAV DWIAGNIYWT DHGFNLIEVA RLNGSFRYVI ISQGLDQPRS
2010 2020 2030 2040 2050
IAVHPEKGFL FWTEWGQVPC IGKARLDGSE KVMIVSVGIT WPNGISIDYE
2060 2070 2080 2090 2100
ENKLYWCDAR SDKIERIDLD TGANREVLLS GSNVDLFSVA VFGAYIYWSD
2110 2120 2130 2140 2150
RAHANGSVRR GHKNDATETV TMRTGLGVNL KEIKIFNRVR EKGTNVCAKE
2160 2170 2180 2190 2200
NGGCQQLCLY RGNSRRTCAC AHGYLAGDGV TCLRHEGYLL YSGRTILKSI
2210 2220 2230 2240 2250
HLSDETNLNS PVRPYENPNY FKNIIALAFD YNQRREGTNR IFYSDAHFGN
2260 2270 2280 2290 2300
IQLIKDNWED RQVIVENVGS VEGLAYHRAW DTLYWTSSST SSITRHTVDQ
2310 2320 2330 2340 2350
TRPGAIDREA VITMSEDDHP HVLALDECQN LMFWTNWNEQ HPSIMRATLT
2360 2370 2380 2390 2400
GKNAHVVVST DILTPNGLTI DHRAEKLYFS DGSLGKIERC EYDGSQRHVI
2410 2420 2430 2440 2450
VKSGPGTFLS LAVYDSYIFW SDWGRRAILR SNKYTGGETK ILRSDIPHQP
2460 2470 2480 2490 2500
MGIIAVANDT NSCELSPCAL LNGGCHDLCL LTPDGRVNCS CRGDRVLLAN
2510 2520 2530 2540 2550
NRCVTKNSSC NIYSEFECGN GDCVDYVLTC DGIPHCKDKS DEKLLYCENR
2560 2570 2580 2590 2600
SCRSGFKPCY NRRCVPHGKL CDGTNDCGDS SDELDCKVST CSTVEFRCAD
2610 2620 2630 2640 2650
GTCIPRSARC NQNMDCSDAS DEKGCNNTDC THFYKLGVKS TGFIRCNSTS
2660 2670 2680 2690 2700
LCVLPSWICD GSNDCGDYSD ELKCPVQNKH KCEENYFGCP SGRCILNTWV
2710 2720 2730 2740 2750
CDGQKDCEDG LDELHCDSSC SWNQFACSVK KCISKHWICD GEDDCGDSLD
2760 2770 2780 2790 2800
ESDSICGAVT CAADMFSCQG SHACVPQHWL CDGERDCPDG SDELSSAGCA
2810 2820 2830 2840 2850
PNNTCDENAF MCHNKVCIPK QFVCDHDDDC GDGSDEFLQC GYRQCGPEEF
2860 2870 2880 2890 2900
RCADGRCLVN TLWQCDGDFD CPDSSDEAPI NPRCRSAEHS CNSSFFMCKN
2910 2920 2930 2940 2950
GRCIPSDGLC DIRDDCGDGS DETNCHINEC LSKKISGCSQ DCQDLPVSYK
2960 2970 2980 2990 3000
CKCWPGFQLK DDGKTCVDID ECSSGFPCSQ QCINTYGTYK CHCAEGYETQ
3010 3020 3030 3040 3050
PDNPNGCRSL SDEEPFLILA DQHEIRKIST DGSNYTLLKQ GLNNVIALDF
3060 3070 3080 3090 3100
DYREEFIYWI DSSRPNGSRI NRMCLNGSDI KVVHNTAVPN ALAVDWIGKN
3110 3120 3130 3140 3150
LYWSDTEKRI IEVSKLNGLY PTVLVSKRLK FPRDLSLDPR AGNLYWIDCC
3160 3170 3180 3190 3200
EYPHIGRVGM DGTNQSVVIE TKISRPMALT IDYVNHRLYW ADENHIEFSN
3210 3220 3230 3240 3250
MDGSHRHKVP NQDIPGVIAL TLFEDYIYWT DGKTKSLSRV HKTSGADRLS
3260 3270 3280 3290 3300
LINSWHAITD IQVYHSYRQP DVSKHLCTVN NGGCSHLCLL GPGKTHTCAC
3310 3320 3330 3340 3350
PTNFYLAADN RTCLSNCTAS QFRCKTDKCI PFWWKCDTVD DCGDGSDEPD
3360 3370 3380 3390 3400
DCPEFKCQPG RFQCGTGLCA LPAFICDGEN DCGDNSDELN CDTHVCLAGQ
3410 3420 3430 3440 3450
FKCTKNKKCI PVNLRCNGQD DCGDEEDEKD CPENSCSPDY FQCKTTKHCI
3460 3470 3480 3490 3500
SKLWVCDEDP DCADASDEAN CDKKTCGPHE FQCKNNNCIP DHWRCDNQND
3510 3520 3530 3540 3550
CSDNSDEDNC KPQTCTLKDF LCSNGDCVSS RFWCDGEFDC ADGSDEKNCE
3560 3570 3580 3590 3600
TSCSKDQFQC SNGQCLSAKW KCDGHEDCKY GEDEKNCEPA FPVCSSSEYM
3610 3620 3630 3640 3650
CASGGCLSAS LKCNGEPDCV DGSDEMDCVI ECKEDQFQCK NKAYCIPIRW
3660 3670 3680 3690 3700
LCDGIYDCVD GSDEETCGRG GSICRDDEFL CNNSLCKLHF WVCDGEDDCG
3710 3720 3730 3740 3750
DNSDEAPDMC VKFLCPPTRP YRCRNDRICL QLEKICNGIN DCGDNSDEEH
3760 3770 3780 3790 3800
CSGKLSLKSK PCKKDEFTCS NRNCIPMELQ CDSLDDCGDG SDEQGCLKTP
3810 3820 3830 3840 3850
IEHTCENNGN PCGDDAYCNQ IKTSVFCRCK PGFQRNMKGR ECADLNECLL
3860 3870 3880 3890 3900
FGICSHHCLN TRGSYKCVCD QNFQEKNNSC IAKGSEDQAL YIANDTDILG
3910 3920 3930 3940 3950
FVYPFNYSGG HQQISHVEHN SRITGMDVHY QRNVIVWSTQ FNPGGIFYKM
3960 3970 3980 3990 4000
IDAREKRQAN SGLICPEFKR PRDIAVDWVA GNVYWTDHSR MHWFSYYTTH
4010 4020 4030 4040 4050
WTSLRYSINV GQLNGPNCTR LLTNMAGEPY AIAVNPKRGM MYWTVIGDHS
4060 4070 4080 4090 4100
HIEEAAMDGT LRRVLVQKNL QRPTGLTVDH FGERIYWADF ELSIIGSVLY
4110 4120 4130 4140 4150
DGSSPVVSVS SKQGLLHPHR IDVFEDYIYG AGPKNGIFRV QKFGHGSVEV
4160 4170 4180 4190 4200
LALGVDKTKS ILVSHRYKQL NLPNPCLDLS CDFLCLLNPS GATCICPEGK
4210 4220 4230 4240 4250
YMMNGTCHDD SLLDDSCKLT CENGGRCILN EKGDLRCHCW PSYSGGRCEV
4260 4270 4280 4290 4300
NHCSNYCQNG GTCIPSTLGR PTCICALGFT GPNCGKAVCE DSCHNGGSCV
4310 4320 4330 4340 4350
VTAGNQPYCH CQADYTGDRC QYYVCHHYCV NSESCTIGND GSVECVCPTR
4360 4370 4380 4390 4400
YEGPKCEIDK CVRCHGGHCI INKDNEDIFC NCTNGKIASS CQLCDGYCYN
4410 4420 4430 4440 4450
GGTCQLDPET SIPVCVCSTN WSGTQCERPA PKSSKSEHIS TRSIAIIVPL
4460 4470 4480 4490 4500
VLLVTLVTTL VIGLVVCKRK RRTKTIRRQP IINGGINVEI GNPSYNMYEV
4510 4520 4530 4540 4550
DHDHSDGGLL EPSFMIDPVK SRYIGGGSSA FKLPHTAPPI YLNSDLKGPL
4560 4570 4580 4590
TFGPTNYSNP VYAKLYMDGQ NCRNSLASVD ERKELLPKKI EIGIRETVA
Length:4,599
Mass (Da):513,634
Last modified:October 1, 2000 - v1
Checksum:i11462A3354FFB200
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti4521 – 455333Missing in BAC29188. (PubMed:16141072)CuratedAdd
BLAST
Sequence conflicti4552 – 45521F → S in BAC28594. (PubMed:16141072)Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF270884 mRNA. Translation: AAF81758.1.
AK035795 mRNA. Translation: BAC29188.1.
AK034122 mRNA. Translation: BAC28594.1.
UniGeneiMm.441398.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF270884 mRNA. Translation: AAF81758.1 .
AK035795 mRNA. Translation: BAC29188.1 .
AK034122 mRNA. Translation: BAC28594.1 .
UniGenei Mm.441398.

3D structure databases

ProteinModelPortali Q9JI18.
SMRi Q9JI18. Positions 32-111, 136-833, 845-4205, 4215-4357.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi Q9JI18. 7 interactions.
MINTi MINT-4998267.
STRINGi 10090.ENSMUSP00000054275.

PTM databases

PhosphoSitei Q9JI18.

Proteomic databases

PaxDbi Q9JI18.
PRIDEi Q9JI18.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Organism-specific databases

MGIi MGI:2151136. Lrp1b.

Phylogenomic databases

eggNOGi NOG235850.
HOVERGENi HBG006292.
InParanoidi Q9JI18.

Miscellaneous databases

ChiTaRSi Lrp1b. mouse.
PROi Q9JI18.
SOURCEi Search...

Gene expression databases

Genevestigatori Q9JI18.

Family and domain databases

Gene3Di 2.120.10.30. 8 hits.
4.10.400.10. 31 hits.
InterProi IPR011042. 6-blade_b-propeller_TolB-like.
IPR026823. cEGF.
IPR000742. EG-like_dom.
IPR001881. EGF-like_Ca-bd_dom.
IPR013032. EGF-like_CS.
IPR000152. EGF-type_Asp/Asn_hydroxyl_site.
IPR018097. EGF_Ca-bd_CS.
IPR009030. Growth_fac_rcpt_N_dom.
IPR023415. LDLR_class-A_CS.
IPR000033. LDLR_classB_rpt.
IPR002172. LDrepeatLR_classA_rpt.
[Graphical view ]
Pfami PF12662. cEGF. 1 hit.
PF00008. EGF. 1 hit.
PF07645. EGF_CA. 2 hits.
PF00057. Ldl_recept_a. 30 hits.
PF00058. Ldl_recept_b. 11 hits.
[Graphical view ]
PRINTSi PR00261. LDLRECEPTOR.
SMARTi SM00181. EGF. 16 hits.
SM00179. EGF_CA. 4 hits.
SM00192. LDLa. 32 hits.
SM00135. LY. 36 hits.
[Graphical view ]
SUPFAMi SSF57184. SSF57184. 6 hits.
SSF57424. SSF57424. 32 hits.
PROSITEi PS00010. ASX_HYDROXYL. 4 hits.
PS00022. EGF_1. 5 hits.
PS01186. EGF_2. 9 hits.
PS50026. EGF_3. 9 hits.
PS01187. EGF_CA. 3 hits.
PS01209. LDLRA_1. 27 hits.
PS50068. LDLRA_2. 32 hits.
PS51120. LDLRB. 36 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The structure of the mouse homologue of the human candidate tumor suppressor gene LRP1B/LRP-DIT."
    Yaklichkin S., Lisitsyn N.
    Submitted (MAY-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
  2. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 3770-4599.
    Strain: C57BL/6J.
    Tissue: Cerebellum.

Entry informationi

Entry nameiLRP1B_MOUSE
AccessioniPrimary (citable) accession number: Q9JI18
Secondary accession number(s): Q8BZD3, Q8BZM7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 26, 2004
Last sequence update: October 1, 2000
Last modified: November 26, 2014
This is version 115 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3