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Q9JHZ1 (Q9JHZ1_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified March 6, 2013. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Androgen receptor-related apoptosis-associated protein CBL27 EMBL AAF86977.1
Gene names
Name:Tnrc6b RGD 621428
Synonyms:Cbl27 RGD 621428
OrganismRattus norvegicus (Rat) EMBL AAF86977.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length249 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Molecular functionReceptor EMBL AAF86977.1
Gene Ontology (GO)
   Biological_processgene silencing by RNA

Inferred from electronic annotation. Source: InterPro

   Molecular_functionnucleotide binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9JHZ1 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: EF58F970CE37D021

FASTA24926,072
        10         20         30         40         50         60 
MWKNHISSRN TTPLPRPPPG LTNPKPASPW SSTAPRSVRG WGTQDSRIAS ASTWSDGGSV 

        70         80         90        100        110        120 
RPSYWLVLHN LTPQIDGSTL RTICMQHGPL LTFHLNLTQG TALIRYSTKQ EAAKAQTALH 

       130        140        150        160        170        180 
MCVLGNTTIL AEFATEDEVS RFLAQAQPPT PAATPSAPAT GWQSLETSQN QADPVGPALN 

       190        200        210        220        230        240 
LFGGSTGLGQ WSSSAGGSSG ADLAGTSLWG PPNYSSSLWG VPTVEDPHRM GSPAPLLPGD 


LLGGGSDSI

« Hide

References

[1]"Cloning and Characterization of a Novel Androgen Receptor-Related Apoptosis-Associated Gene in the Rat Spleen."
Chan M.T.W., Ng C.C.Y., Lim E.K.B., Huynh H.T.
Submitted (JUN-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Sprague-Dawley EMBL AAF86977.1.
Tissue: Spleen EMBL AAF86977.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AF275151 mRNA. Translation: AAF86977.1.
IPIIPI00389253.
UniGeneRn.17120.

3D structure databases

ProteinModelPortalQ9JHZ1.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ9JHZ1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

UCSCRGD:621428. rat.

Organism-specific databases

RGD621428. Tnrc6b.

Phylogenomic databases

HOVERGENHBG073539.
InParanoidQ9JHZ1.

Gene expression databases

ArrayExpressQ9JHZ1.
GenevestigatorQ9JHZ1.

Family and domain databases

Gene3D3.30.70.330. 1 hit.
InterProIPR026804. GW182_fam.
IPR012677. Nucleotide-bd_a/b_plait.
[Graphical view]
PANTHERPTHR31070. PTHR31070. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ9JHZ1_RAT
AccessionPrimary (citable) accession number: Q9JHZ1
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: March 6, 2013
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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