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Q9IKB7

- GP_TSWVD

UniProt

Q9IKB7 - GP_TSWVD

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Protein

Envelope glycoprotein

Gene

GP

Organism
Tomato spotted wilt virus (isolate D) (TSWV)
Status
Reviewed - Annotation score: 4 out of 5- Protein inferred from homologyi

Functioni

Glycoprotein G1 and glycoprotein G2 interact with each other and are present at the surface of the virion. They are able to attach the virion to a cell receptor and to promote fusion of membranes after endocytosis of the virion (By similarity).By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sitei484 – 4852Cleavage; by host signal peptidaseBy similarity

GO - Biological processi

  1. fusion of virus membrane with host endosome membrane Source: UniProtKB-KW
  2. modulation by virus of host morphology or physiology Source: InterPro
  3. virion attachment to host cell Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Fusion of virus membrane with host endosomal membrane, Fusion of virus membrane with host membrane, Host-virus interaction, Viral attachment to host cell, Viral penetration into host cytoplasm, Virus entry into host cell

Names & Taxonomyi

Protein namesi
Recommended name:
Envelope glycoprotein
Short name:
GP
Alternative name(s):
M polyprotein
Cleaved into the following 2 chains:
Gene namesi
Name:GP
OrganismiTomato spotted wilt virus (isolate D) (TSWV)
Taxonomic identifieri267288 [NCBI]
Taxonomic lineageiVirusesssRNA negative-strand virusesBunyaviridaeTospovirus
Virus hostiFrankliniella occidentalis (Western flower thrips) [TaxID: 133901]
Scirtothrips dorsalis [TaxID: 163899]
Solanum lycopersicum (Tomato) (Lycopersicon esculentum) [TaxID: 4081]
Thrips tabaci [TaxID: 161014]

Subcellular locationi

Chain Glycoprotein G1 : Virion membrane Curated; Single-pass type I membrane protein Curated. Host Golgi apparatus membrane Curated; Single-pass type I membrane protein Curated. Host endoplasmic reticulum membrane Curated; Single-pass type I membrane protein Curated
Note: Glycoprotein G1 alone is retained in the membrane of the endoplasmic reticulum, but not transported to the Golgi. Coexpression of G1 and G2 results in efficient transport of G1 to the Golgi complex, indicating that their interaction is essential for proper targeting to this organelle, where virion budding occurs (By similarity).By similarity
Chain Glycoprotein G2 : Virion membrane Curated; Single-pass type I membrane protein Curated. Host Golgi apparatus membrane Curated; Single-pass type I membrane protein Curated
Note: Glycoprotein G2 is retained in the Golgi complex and probably contains a Golgi retention signal.By similarity

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini36 – 345310LumenalSequence AnalysisAdd
BLAST
Transmembranei346 – 36621HelicalSequence AnalysisAdd
BLAST
Topological domaini367 – 484118CytoplasmicSequence AnalysisAdd
BLAST
Topological domaini485 – 1067583LumenalSequence AnalysisAdd
BLAST
Transmembranei1068 – 108821HelicalSequence AnalysisAdd
BLAST
Topological domaini1089 – 113547CytoplasmicSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. host cell endoplasmic reticulum Source: UniProtKB-KW
  2. host cell Golgi apparatus Source: UniProtKB-KW
  3. host cell membrane Source: UniProtKB-KW
  4. integral component of membrane Source: UniProtKB-KW
  5. virion Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Host endoplasmic reticulum, Host Golgi apparatus, Host membrane, Membrane, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3535Sequence AnalysisAdd
BLAST
Chaini36 – 11351100Envelope glycoproteinPRO_0000036862Add
BLAST
Chaini36 – 484449Glycoprotein G1By similarityPRO_0000036863Add
BLAST
Chaini485 – 1135651Glycoprotein G2By similarityPRO_0000036864Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi116 – 1161N-linked (GlcNAc...); by hostSequence Analysis
Glycosylationi210 – 2101N-linked (GlcNAc...); by hostSequence Analysis
Glycosylationi340 – 3401N-linked (GlcNAc...); by hostSequence Analysis
Glycosylationi588 – 5881N-linked (GlcNAc...); by hostSequence Analysis
Glycosylationi605 – 6051N-linked (GlcNAc...); by hostSequence Analysis
Glycosylationi980 – 9801N-linked (GlcNAc...); by hostSequence Analysis

Post-translational modificationi

Specific enzymatic cleavages in vivo yield mature proteins including glycoprotein G1 and glycoprotein G2.By similarity
Glycosylated. Glycosylation is essential for proper subcellular location (By similarity).By similarity

Keywords - PTMi

Glycoprotein

Interactioni

Subunit structurei

G1 and G2 interacts with each other.By similarity

Family & Domainsi

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi41 – 433Cell attachment siteSequence Analysis

Domaini

The cell attachment site present in these glycoproteins may help in the adhesion of virus to cells.

Sequence similaritiesi

Keywords - Domaini

Signal, Transmembrane, Transmembrane helix

Family and domain databases

InterProiIPR005167. Bunya_G1.
IPR014414. M_poly_TospoV.
[Graphical view]
PfamiPF03557. Bunya_G1. 1 hit.
[Graphical view]
PIRSFiPIRSF003960. M_poly_TospoV. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9IKB7-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MRILKLLELV VKVSLFTIAL SSVLLAFLTF RATDAKVEII RGDHPEIYDD
60 70 80 90 100
SAENEVPTAA SIQREAILET LTNLVLESRT PGTRQIREEK LTIPISTEPA
110 120 130 140 150
TQKTISVLDL PNNCLNASSL KCEIKGISTY NVYYQVENNG VIYSSVSDSA
160 170 180 190 200
EGLEKCDNSL NLPKRFSKVP VIPITKLDNK RHFSVGTNFF IPESLTQDNY
210 220 230 240 250
PITYNSYPTN GTVSLQTVKL SGDCKITKSN FANPYTVSIT SPEKIMGYLI
260 270 280 290 300
KKPGENVEHK VIAFSGSASI TFTEEMLDGE HNLLCGDKSA KIPKTNKRVR
310 320 330 340 350
DCIIKYSKSI YKQTACINFS WIRLILIALL IYFPIRWLVN KTTKPLFLWY
360 370 380 390 400
DLMGLITYPV LLLINCLWKY FPFKCSNCGN LCIVTRECTK VCICNKSKAS
410 420 430 440 450
KEHSSECPIL SKEADHDYNK HKWTSMEWFH LIVNTKLSLS LLKFVTEILI
460 470 480 490 500
GLVILSQIPM SMAQTTQCLS GCFYVPGCPF LVTSKFEKCP EKDQCYCNVK
510 520 530 540 550
EDKIIESIFG TNIVIEGPND CIENQNCIAR PSIDNLIKCR LGCEYLDLFQ
560 570 580 590 600
NKPLYNGFSD YTESSLGLTS VGLYEAKRLR NGIIDSYNRT DKISGMIAGD
610 620 630 640 650
SLDKNETSIP ENILPRQSLI FDSVVDGKYR YMIEQSLLGG GGTIFMLNDK
660 670 680 690 700
TSETAKKFVI YIKSVGIHHE VSEEYTTAPI QSTHTDFYPT CIGNCDTCRK
710 720 730 740 750
NQALTGFQDF CITPTSYWGC EEAWCFAINE GATCGFCRNI YDIDKSYRIY
760 770 780 790 800
SVLKSTIVAD VCISGILGGQ CSRITEEVPY ENTLFQADIQ SDLHNDGITI
810 820 830 840 850
GELIAHGPDS HIYSGNIANL NDPVKMFGHP QLTHDGVPIF TKKTLEGDDM
860 870 880 890 900
SWDCAATGKK SVTIKTCGYD TYRFRSGLEQ ISDIPVSFKD FSSFFLEKSF
910 920 930 940 950
SLGELKIVVD LPSDLFKVVP KKPSITSTSL NCNGCLLCGQ GLSCILEFFS
960 970 980 990 1000
DLTFSTAISI DACSLSTYQL AVKKGSNKYN ITMFCSANPD KKKMTLYPEG
1010 1020 1030 1040 1050
NPDIPVEVLV NNVIIEEPEN IIDQNDEYAH EEQQYNSDSS AWGFWDYIKS
1060 1070 1080 1090 1100
PFNFIASYFG SFFDTIRVVL LIAFIFLVIY FCSILTSICK GYVKHKSYKS
1110 1120 1130
RSKIEDDDEP EIKAPMLMKD TMTRRRPPMD FSHLV
Length:1,135
Mass (Da):127,554
Last modified:October 1, 2000 - v1
Checksum:i53F271999CABEC33
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF208497 Genomic RNA. Translation: AAF80979.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF208497 Genomic RNA. Translation: AAF80979.1 .

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

InterProi IPR005167. Bunya_G1.
IPR014414. M_poly_TospoV.
[Graphical view ]
Pfami PF03557. Bunya_G1. 1 hit.
[Graphical view ]
PIRSFi PIRSF003960. M_poly_TospoV. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Overcoming host- and pathogen-mediated resistance in tomato and tobacco maps to the M RNA of Tomato spotted wilt virus."
    Hoffmann K., Qiu W.P., Moyer J.W.
    Mol. Plant Microbe Interact. 14:242-249(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiGP_TSWVD
AccessioniPrimary (citable) accession number: Q9IKB7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 13, 2004
Last sequence update: October 1, 2000
Last modified: October 29, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3