##gff-version 3 Q9IJX4 UniProtKB Chain 1 1771 . . . ID=PRO_0000398372;Note=Replicase polyprotein Q9IJX4 UniProtKB Chain 1 166 . . . ID=PRO_0000398374;Note=Protein 1A;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9IJX4 UniProtKB Chain 167 190 . . . ID=PRO_0000398373;Note=Protein 2A;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9IJX4 UniProtKB Chain 191 328 . . . ID=PRO_0000398375;Note=Protein 2B;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9IJX4 UniProtKB Chain 329 739 . . . ID=PRO_0000398376;Note=Protein 2C;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9IJX4 UniProtKB Chain 909 1220 . . . ID=PRO_0000398379;Note=3C-like protease;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9IJX4 UniProtKB Chain 1221 1771 . . . ID=PRO_0000398380;Note=RNA-directed RNA polymerase 3D-POL;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9IJX4 UniProtKB Domain 482 656 . . . Note=SF3 helicase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00551 Q9IJX4 UniProtKB Domain 954 1201 . . . Note=Peptidase C3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01222 Q9IJX4 UniProtKB Domain 1495 1634 . . . Note=RdRp catalytic;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00539 Q9IJX4 UniProtKB Region 16 25 . . . Note=BC-box;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:30308158;Dbxref=PMID:30308158 Q9IJX4 UniProtKB Region 106 114 . . . Note=Interaction with and inhibition of host AGO2;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:30308158;Dbxref=PMID:30308158 Q9IJX4 UniProtKB Region 919 942 . . . Note=Disordered;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q9IJX4 UniProtKB Coiled coil 1 29 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9IJX4 UniProtKB Coiled coil 1385 1413 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9IJX4 UniProtKB Active site 1003 1003 . . . Note=For picornain 3C-like protease activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01222 Q9IJX4 UniProtKB Active site 1063 1063 . . . Note=For picornain 3C-like protease activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01222 Q9IJX4 UniProtKB Active site 1162 1162 . . . Note=For picornain 3C-like protease activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01222 Q9IJX4 UniProtKB Binding site 510 517 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00551 Q9IJX4 UniProtKB Site 146 146 . . . Note=Involved in the inhibition of host stress granules formation;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28003491;Dbxref=PMID:28003491 Q9IJX4 UniProtKB Site 166 167 . . . Note=Cleavage%3B by ribosomal skip;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9IJX4 UniProtKB Site 190 191 . . . Note=Cleavage%3B by 3C-like protease;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9IJX4 UniProtKB Site 328 329 . . . Note=Cleavage%3B by 3C-like protease;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9IJX4 UniProtKB Site 739 740 . . . Note=Cleavage%3B by 3C-like protease;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9IJX4 UniProtKB Site 884 885 . . . Note=Cleavage%3B by 3C-like protease;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9IJX4 UniProtKB Site 908 909 . . . Note=Cleavage%3B by 3C-like protease;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9IJX4 UniProtKB Site 1220 1221 . . . Note=Cleavage%3B by 3C-like protease;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9IJX4 UniProtKB Mutagenesis 106 106 . . . Note=Reduced host AGO2 binding%2C loss of AGO2 inhibition and loss of RNA silencing inhibition. P->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:30308158;Dbxref=PMID:30308158 Q9IJX4 UniProtKB Mutagenesis 114 114 . . . Note=Reduced host AGO2 binding%2C loss of AGO2 inhibition and loss of RNA silencing inhibition. Loss of replication efficiency. F->A%2CD%2CG%2CN%2CP%2CR;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:30308158;Dbxref=PMID:30308158 Q9IJX4 UniProtKB Mutagenesis 146 146 . . . Note=Attenuated infection. Loss of inhibition of host stress granules formation. R->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28003491;Dbxref=PMID:28003491 Q9IJX4 UniProtKB Helix 15 29 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6C3R Q9IJX4 UniProtKB Beta strand 37 43 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6C3R Q9IJX4 UniProtKB Turn 49 52 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6C3R Q9IJX4 UniProtKB Beta strand 55 61 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6C3R Q9IJX4 UniProtKB Helix 66 83 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6C3R Q9IJX4 UniProtKB Helix 90 103 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6C3R Q9IJX4 UniProtKB Turn 110 112 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6C3R Q9IJX4 UniProtKB Beta strand 117 121 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6C3R Q9IJX4 UniProtKB Helix 123 127 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6C3R Q9IJX4 UniProtKB Helix 130 136 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6C3R Q9IJX4 UniProtKB Helix 142 149 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6C3R