Q9IJQ0 (Q9IJQ0_9HIV1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Envelope glycoprotein gp41 EMBL AAF74234.1

Gene names

Name:

env EMBL AAF74234.1

Organism

Human immunodeficiency virus 1 EMBL AAF74234.1

Taxonomic identifier

11676 [NCBI]

Taxonomic lineage

Viruses › Retro-transcribing viruses › Retroviridae › Orthoretrovirinae › Lentivirus › Primate lentivirus group

Virus host

Homo sapiens (Human) [TaxID: 9606]

Protein attributes

Sequence length	122 AA.
Sequence status	Fragment.
Protein existence	Evidence at protein level

Ontologies

Keywords
Cellular component	Viral envelope protein EMBL AAF74234.1 Virion
Technical term	3D-structure PDB 3LEX PDB 3LEY
Gene Ontology (GO)
Cellular_component	viral envelope Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	structural molecule activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL AAF74234.1
	Non-terminal residue	122	1	EMBL AAF74234.1

Sequences

	Sequence		Length	Mass (Da)
	Q9IJQ0 [UniParc]. Last modified October 1, 2000. Version 1. Checksum: 7C8AE589350B76B5	FASTA	122	14,550
	10 20 30 40 50 60 AQHHLLQLTV WGIKQLQARV LAVERYLKDH QLLGIWGCSG KLICTTAVPW NASWSNKSLN 70 80 90 100 110 120 KIWDNMTWME WEREIDNYTG LIYTLLEESQ NQQEKNEQEL LELDKWAGLW NWFDISNWLG YI

References

[1]	"Evidence of a high frequency of HIV-1 subtype F infections in a heterosexual population in Buenos Aires, Argentina." Masciotra S., Livellara B., Belloso W., Clara L., Tanuri A., Ramos A.C., Baggs J., Lal R., Pieniazek D. AIDS Res. Hum. Retroviruses 16:1007-1014(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Elicitation of structure-specific antibodies by epitope scaffolds." Ofek G., Guenaga F.J., Schief W.R., Skinner J., Baker D., Wyatt R., Kwong P.D. Proc. Natl. Acad. Sci. U.S.A. 107:17880-17887(2010) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.97 ANGSTROMS) OF 100-107.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF220682 Genomic DNA. Translation: AAF74234.1.
3D structure databases
HSSP	HSSP built from PDB template 1IM7 based on UniProtKB P12488.
ProteinModelPortal	Q9IJQ0.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR000328. Retroviral_envelope_protein. [Graphical view]
Pfam	PF00517. GP41. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9IJQ0_9HIV1

Accession

Primary (citable) accession number: Q9IJQ0

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2000
Last sequence update:	October 1, 2000
Last modified:	April 3, 2013
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)