Unreviewed, UniProtKB/TrEMBL Q9I9Z9 (Q9I9Z9_BAMTH)

Names and origin

Protein names

Submitted name:
    Gag polyprotein EMBL AAF64680.1

Gene names

Name:

gag EMBL AAF64680.1

Organism

Bambusicola thoracica (Chinese bamboo-partridge) EMBL AAF64680.1

Taxonomic identifier

9083 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Archosauria › Dinosauria › Saurischia › Theropoda › Coelurosauria › Aves › Neognathae › Galliformes › Phasianidae › Perdicinae › Bambusicola

Protein attributes

Sequence length	405 AA.
Sequence status	Fragment.
Sequence processing	The displayed sequence is not processed.
Protein existence	Predicted.

Ontologies

Gene Ontology (GO)
Biological process	viral reproduction Inferred from electronic annotation. Source: InterPro
Cellular component	viral capsid Inferred from electronic annotation. Source: InterPro
Molecular function	structural molecule activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL AAF64680.1
	Non-terminal residue	405	1	EMBL AAF64680.1

Sequences

	Sequence		Length	Mass (Da)
	Q9I9Z9-1 [UniParc]. Last modified October 1, 2000. Version 1. Checksum: 1F8CD9334ADFC983	FASTA	405	42,386
	10 20 30 40 50 60 ACKTYCGKNS PSKKEIGTLL SLLQKEGLLT SPSDLYTPGL WDPITAALAQ RVMVLGKSGE 70 80 90 100 110 120 FKTWGLVLGA LKAAREEQVT SEQAKFWLGL GGGTVSPTGP AGKPTAEPQN GEEEKAVIAQ 130 140 150 160 170 180 QETKMAPGEA TAPKATSCYR CETGAGCGCA TVAPSAPPPY VGSGLYPSLE GLGGPGGESV 190 200 210 220 230 240 VTSLAGRDDP PRGVESVATS LAGRDDPPRG VEQRAEPRCS DPAPGPALTD WARIREELTA 250 260 270 280 290 300 AAPSVVAMPV VIKTEGPAWT PLEPKVITRL ADTVRTKGLR SPVTIAEVEA LMSSSLLPHD 310 320 330 340 350 360 VTNLMRVILA PAQYALWSDA WDVQLQTVIA AATRDPRHPA NGQRRGERTN LDRLKGLADG 370 380 390 400 MAGNPEGQAA LLRPGELVAI TASALQAFRE VARLAEPTVP WADIT

References

[1]	"Cospeciation and horizontal transmission of avian sarcoma and leukosis virus gag genes in galliform birds." Dimcheff D.E., Drovetski S.V., Krishnan M., Mindell D.P. J. Virol. 74:3984-3995(2000) [PubMed: 10756010] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AF225298 Genomic DNA. Translation: AAF64680.1.
3D structure databases
HSSP	HSSP built from PDB template 1EM9 based on UniProtKB P03322.
SMR	Q9I9Z9. Positions 223-395.
ModBase	Search...
Phylogenomic databases
HOVERGEN	Q9I9Z9.
Family and domain databases
InterPro	IPR004028. Gag_M. IPR000721. Gag_p24. IPR012344. Matrix_HIV/RSV_N. IPR008919. Retrov_capsid_N. [Graphical view]
Gene3D	G3DSA:1.10.150.90. Matrix_HIV/RSV_N. 1 hit. G3DSA:1.10.375.10. Retrov_capsid_N. 1 hit.
Pfam	PF00607. Gag_p24. 1 hit. PF02813. Retro_M. 1 hit. [Graphical view]
ProDom	PD002871. Retro_M. 1 hit. [Graphical view] [Entries sharing at least one domain]
ProtoNet	Search...

Entry information

Entry name

Q9I9Z9_BAMTH

Accession

Primary (citable) accession number: Q9I9Z9

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2000
Last sequence update:	October 1, 2000
Last modified:	July 22, 2008
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)