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Q9I9Z9 (Q9I9Z9_BAMTH) Unreviewed, UniProtKB/TrEMBL

Last modified October 5, 2010. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:gag EMBL AAF64680.1
OrganismBambusicola thoracicus (Chinese bamboo-partridge) (Perdix thoracica) EMBL AAF64680.1
Taxonomic identifier9083 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalliformesPhasianidaePerdicinaeBambusicola

Protein attributes

Sequence length405 AA.
Sequence statusFragment.
Protein existencePredicted

Ontologies

Gene Ontology (GO)
   Biological processviral reproduction

Inferred from electronic annotation. Source: InterPro

   Cellular componentviral capsid

Inferred from electronic annotation. Source: InterPro

   Molecular functionstructural molecule activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAF64680.1
Non-terminal residue4051 EMBL AAF64680.1

Sequences

Sequence LengthMass (Da)Tools
Q9I9Z9 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: 1F8CD9334ADFC983

FASTA40542,386
        10         20         30         40         50         60 
ACKTYCGKNS PSKKEIGTLL SLLQKEGLLT SPSDLYTPGL WDPITAALAQ RVMVLGKSGE 

        70         80         90        100        110        120 
FKTWGLVLGA LKAAREEQVT SEQAKFWLGL GGGTVSPTGP AGKPTAEPQN GEEEKAVIAQ 

       130        140        150        160        170        180 
QETKMAPGEA TAPKATSCYR CETGAGCGCA TVAPSAPPPY VGSGLYPSLE GLGGPGGESV 

       190        200        210        220        230        240 
VTSLAGRDDP PRGVESVATS LAGRDDPPRG VEQRAEPRCS DPAPGPALTD WARIREELTA 

       250        260        270        280        290        300 
AAPSVVAMPV VIKTEGPAWT PLEPKVITRL ADTVRTKGLR SPVTIAEVEA LMSSSLLPHD 

       310        320        330        340        350        360 
VTNLMRVILA PAQYALWSDA WDVQLQTVIA AATRDPRHPA NGQRRGERTN LDRLKGLADG 

       370        380        390        400 
MAGNPEGQAA LLRPGELVAI TASALQAFRE VARLAEPTVP WADIT 

« Hide

References

[1]"Cospeciation and horizontal transmission of avian sarcoma and leukosis virus gag genes in galliform birds."
Dimcheff D.E., Drovetski S.V., Krishnan M., Mindell D.P.
J. Virol. 74:3984-3995(2000) [PubMed: 10756010] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF225298 Genomic DNA. Translation: AAF64680.1.

3D structure databases

HSSPHSSP built from PDB template 1EM9 based on UniProtKB P03322.
ProteinModelPortalQ9I9Z9.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

HOVERGENHBG053781.

Family and domain databases

InterProIPR004028. Gag_M.
IPR000721. Gag_p24.
IPR012344. Matrix_N_HIV/RSV.
IPR008919. Retrov_capsid_N.
IPR010999. Retrovr_matrix_N.
[Graphical view]
Gene3DG3DSA:1.10.150.90. Matrix_HIV/RSV_N. 1 hit.
G3DSA:1.10.375.10. Retrov_capsid_N. 1 hit.
PfamPF00607. Gag_p24. 1 hit.
PF02813. Retro_M. 1 hit.
[Graphical view]
ProDomPD002871. Gag_M. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF47943. Retrov_capsid_N. 1 hit.
SSF47836. Retrovir_matrix. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ9I9Z9_BAMTH
AccessionPrimary (citable) accession number: Q9I9Z9
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: October 5, 2010
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)