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Q9I8A2 (Q9I8A2_CHICK) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 75. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Vacuolar H-ATPase B subunit osteoclast isozyme EMBL AAF73735.1
Gene names
Name:VATB EMBL AAF73735.1
Synonyms:ATP6V1B2 Ensembl ENSGALP00000040076
OrganismGallus gallus (Chicken) [Reference proteome]
Taxonomic identifier9031 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalliformesPhasianidaePhasianinaeGallus

Protein attributes

Sequence length496 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the ATPase alpha/beta chains family. RuleBase RU000339

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAF73735.1 Ensembl ENSGALP00000040076

Sequences

Sequence LengthMass (Da)Tools
Q9I8A2 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: 1CC5D9FDA68BA7BA

FASTA49655,050
        10         20         30         40         50         60 
RRMVNGAGPG GAREQAAALT RDFLSQPRLT YKTVSGVNGP LVILDQVKFP RYAEIVHLTL 

        70         80         90        100        110        120 
PDGTRRSGQV LEVSGSKAVV QVFEGTSGID AKKTSCEFTG DILRTPVSED MLGRVFNGSG 

       130        140        150        160        170        180 
KPIDRGPAVL AEDFLDIMGQ PINPQCRIYP EEMIQTGISA IDGMNSIARG QKIPIFSAAG 

       190        200        210        220        230        240 
LPHNEIAAQI CRQAGLVKKS KDVMDYSEEN FAIVFAAMGV NMETARFFKS DFEENGSMDN 

       250        260        270        280        290        300 
VCLFLNLAND PTIERIITPR LALTTAEFLA YQCEKHVLVI LTDMSSYAEA LREVSAAREE 

       310        320        330        340        350        360 
VPGRRGFPGY MYTDLATIYE RAGRVEGRNG SITQIPILTM PNDDITHPIP DLTGYITEGQ 

       370        380        390        400        410        420 
IYVDRQLHNR QIYPPINVLP SLSRLMKSAI GEGMTRKDHA DVSNQLYACY AIGKDVQAMK 

       430        440        450        460        470        480 
AVVGEEALTS DDLLYLEFLQ KFEKNFIAQG PYENRTVYET LDIGWQLLRI FPKEMLKRIP 

       490 
QTTLAEFYPR DSTAKH 

« Hide

References

« Hide 'large scale' references
[1]"Chicken vacuolar H-ATPase B subunit isozyme."
Andersen P., Lundberg L.G., Stone D.K.
Submitted (JUN-1996) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution."
International Chicken Genome Sequencing Consortium
Hillier L.W., Miller W., Birney E., Warren W., Hardison R.C., Ponting C.P., Bork P., Burt D.W., Groenen M.A.M., Delany M.E., Dodgson J.B., Chinwalla A.T., Cliften P.F., Clifton S.W., Delehaunty K.D., Fronick C., Fulton R.S., Graves T.A. expand/collapse author list , Kremitzki C., Layman D., Magrini V., McPherson J.D., Miner T.L., Minx P., Nash W.E., Nhan M.N., Nelson J.O., Oddy L.G., Pohl C.S., Randall-Maher J., Smith S.M., Wallis J.W., Yang S.-P., Romanov M.N., Rondelli C.M., Paton B., Smith J., Morrice D., Daniels L., Tempest H.G., Robertson L., Masabanda J.S., Griffin D.K., Vignal A., Fillon V., Jacobbson L., Kerje S., Andersson L., Crooijmans R.P., Aerts J., van der Poel J.J., Ellegren H., Caldwell R.B., Hubbard S.J., Grafham D.V., Kierzek A.M., McLaren S.R., Overton I.M., Arakawa H., Beattie K.J., Bezzubov Y., Boardman P.E., Bonfield J.K., Croning M.D.R., Davies R.M., Francis M.D., Humphray S.J., Scott C.E., Taylor R.G., Tickle C., Brown W.R.A., Rogers J., Buerstedde J.-M., Wilson S.A., Stubbs L., Ovcharenko I., Gordon L., Lucas S., Miller M.M., Inoko H., Shiina T., Kaufman J., Salomonsen J., Skjoedt K., Wong G.K.-S., Wang J., Liu B., Wang J., Yu J., Yang H., Nefedov M., Koriabine M., Dejong P.J., Goodstadt L., Webber C., Dickens N.J., Letunic I., Suyama M., Torrents D., von Mering C., Zdobnov E.M., Makova K., Nekrutenko A., Elnitski L., Eswara P., King D.C., Yang S., Tyekucheva S., Radakrishnan A., Harris R.S., Chiaromonte F., Taylor J., He J., Rijnkels M., Griffiths-Jones S., Ureta-Vidal A., Hoffman M.M., Severin J., Searle S.M.J., Law A.S., Speed D., Waddington D., Cheng Z., Tuzun E., Eichler E., Bao Z., Flicek P., Shteynberg D.D., Brent M.R., Bye J.M., Huckle E.J., Chatterji S., Dewey C., Pachter L., Kouranov A., Mourelatos Z., Hatzigeorgiou A.G., Paterson A.H., Ivarie R., Brandstrom M., Axelsson E., Backstrom N., Berlin S., Webster M.T., Pourquie O., Reymond A., Ucla C., Antonarakis S.E., Long M., Emerson J.J., Betran E., Dupanloup I., Kaessmann H., Hinrichs A.S., Bejerano G., Furey T.S., Harte R.A., Raney B., Siepel A., Kent W.J., Haussler D., Eyras E., Castelo R., Abril J.F., Castellano S., Camara F., Parra G., Guigo R., Bourque G., Tesler G., Pevzner P.A., Smit A., Fulton L.A., Mardis E.R., Wilson R.K.
Nature 432:695-716(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Red jungle fowl Ensembl ENSGALP00000040076.
[3]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Red jungle fowl Ensembl ENSGALP00000040076.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AADN02054910 Genomic DNA. No translation available.
AADN02054911 Genomic DNA. No translation available.
U61724 mRNA. Translation: AAF73735.1.
IPIIPI01017308.
PIRJC4198.
UniGeneGga.3876.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSGALT00000040872; ENSGALP00000040076; ENSGALG00000001712.

Phylogenomic databases

GeneTreeENSGT00550000074724.
HOGENOMHOG000165320.
HOVERGENHBG002176.
InParanoidQ9I8A2.

Gene expression databases

ArrayExpressQ9I8A2.

Family and domain databases

HAMAPMF_00310. ATP_synth_B_arch.
InterProIPR020003. ATPase_a/bsu_AS.
IPR004100. ATPase_a/bsu_N.
IPR000793. ATPase_F1/V1/A1-cplx_a/bsu_C.
IPR000194. ATPase_F1/V1/A1_a/bsu_nucl-bd.
IPR005723. ATPase_V1-cplx_bsu.
IPR022879. V-ATPase_su_B/beta.
[Graphical view]
PfamPF00006. ATP-synt_ab. 1 hit.
PF00306. ATP-synt_ab_C. 1 hit.
PF02874. ATP-synt_ab_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR01040. V-ATPase_V1_B. 1 hit.
PROSITEPS00152. ATPASE_ALPHA_BETA. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChEMBLCHEMBL2770.

Entry information

Entry nameQ9I8A2_CHICK
AccessionPrimary (citable) accession number: Q9I8A2
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: May 1, 2013
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)