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Protein
Submitted name:

Probable transcriptional regulator

Gene

PA0477

Organism
Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi25 – 44H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciPAER208964:G1FZ6-482-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Probable transcriptional regulatorImported
Gene namesi
Ordered Locus Names:PA0477Imported
OrganismiPseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)Imported
Taxonomic identifieri208964 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002438 Componenti: Chromosome

Organism-specific databases

PseudoCAPiPA0477

PTM / Processingi

Proteomic databases

PaxDbiQ9I641

Interactioni

Protein-protein interaction databases

STRINGi208964.PA0477

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2ESNX-ray2.10A/B/C/D1-308[»]
ProteinModelPortaliQ9I641
SMRiQ9I641
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9I641

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 65HTH lysR-typeInterPro annotationAdd BLAST58

Phylogenomic databases

eggNOGiENOG41064T2 Bacteria
ENOG4110BBF LUCA
HOGENOMiHOG000103695
InParanoidiQ9I641
OMAiMMNIMHP
PhylomeDBiQ9I641

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR005119 LysR_subst-bd
IPR000847 Tscrpt_reg_HTH_LysR
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00126 HTH_1, 1 hit
PF03466 LysR_substrate, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS50931 HTH_LYSR, 1 hit

Sequencei

Sequence statusi: Complete.

Q9I641-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHPLLRRLDL NLLLVFDALY RHRNVGTAAS ELAISASAFS HALGRLRQGL
60 70 80 90 100
DDELFLRQGN RMQPTQRAEH LAAAVAAALR ALGEGLEEWR PFVPGQSQRT
110 120 130 140 150
FVFAATDYTA FALLPPLMNR LQHSAPGVRL RLVNAERKLS VEALASGRID
160 170 180 190 200
FALGYDEEHE RLPEGIQAHD WFADRYVVVA RRDHPRLAGA PTLEGYLAER
210 220 230 240 250
HAVVTPWNED SGVIDRLLAR SGLRREVAVQ LPTVLAALFL AGSTDFLLTA
260 270 280 290 300
PRHAARALAE AAGLALYPAP FDIPPYVLRL YSHVQHVGRD AHAWMIGQLK

GLDISRTG
Length:308
Mass (Da):34,054
Last modified:March 1, 2001 - v1
Checksum:i0BBABBEA5D7E3389
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004091 Genomic DNA Translation: AAG03866.1
PIRiC83586
RefSeqiNP_249168.1, NC_002516.2
WP_003105226.1, NC_002516.2

Genome annotation databases

EnsemblBacteriaiAAG03866; AAG03866; PA0477
GeneIDi878447
KEGGipae:PA0477
PATRICifig|208964.12.peg.504

Entry informationi

Entry nameiQ9I641_PSEAE
AccessioniPrimary (citable) accession number: Q9I641
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: March 28, 2018
This is version 118 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

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