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Protein
Submitted name:

Probable transcriptional regulator

Gene

PA0477

Organism
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Probable transcriptional regulatorImported
Gene namesi
Ordered Locus Names:PA0477Imported
OrganismiPseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)Imported
Taxonomic identifieri208964 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002438 Componenti: Chromosome

Organism-specific databases

PseudoCAPiPA0477.

PTM / Processingi

Proteomic databases

PaxDbiQ9I641.

Interactioni

Protein-protein interaction databases

STRINGi208964.PA0477.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2ESNX-ray2.10A/B/C/D1-308[»]
ProteinModelPortaliQ9I641.
SMRiQ9I641. Positions 15-303.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9I641.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini8 – 6558HTH lysR-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains HTH lysR-type DNA-binding domain.SAAS annotation

Phylogenomic databases

eggNOGiENOG41064T2. Bacteria.
ENOG4110BBF. LUCA.
HOGENOMiHOG000103695.
InParanoidiQ9I641.
OMAiCPSVYAT.
OrthoDBiEOG6SR906.
PhylomeDBiQ9I641.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50931. HTH_LYSR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9I641-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHPLLRRLDL NLLLVFDALY RHRNVGTAAS ELAISASAFS HALGRLRQGL
60 70 80 90 100
DDELFLRQGN RMQPTQRAEH LAAAVAAALR ALGEGLEEWR PFVPGQSQRT
110 120 130 140 150
FVFAATDYTA FALLPPLMNR LQHSAPGVRL RLVNAERKLS VEALASGRID
160 170 180 190 200
FALGYDEEHE RLPEGIQAHD WFADRYVVVA RRDHPRLAGA PTLEGYLAER
210 220 230 240 250
HAVVTPWNED SGVIDRLLAR SGLRREVAVQ LPTVLAALFL AGSTDFLLTA
260 270 280 290 300
PRHAARALAE AAGLALYPAP FDIPPYVLRL YSHVQHVGRD AHAWMIGQLK

GLDISRTG
Length:308
Mass (Da):34,054
Last modified:March 1, 2001 - v1
Checksum:i0BBABBEA5D7E3389
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004091 Genomic DNA. Translation: AAG03866.1.
PIRiC83586.
RefSeqiNP_249168.1. NC_002516.2.
WP_003105226.1. NZ_ASJY01000094.1.

Genome annotation databases

EnsemblBacteriaiAAG03866; AAG03866; PA0477.
GeneIDi878447.
KEGGipae:PA0477.
PATRICi19835206. VBIPseAer58763_0504.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004091 Genomic DNA. Translation: AAG03866.1.
PIRiC83586.
RefSeqiNP_249168.1. NC_002516.2.
WP_003105226.1. NZ_ASJY01000094.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2ESNX-ray2.10A/B/C/D1-308[»]
ProteinModelPortaliQ9I641.
SMRiQ9I641. Positions 15-303.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi208964.PA0477.

Proteomic databases

PaxDbiQ9I641.

Protocols and materials databases

DNASUi878447.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAG03866; AAG03866; PA0477.
GeneIDi878447.
KEGGipae:PA0477.
PATRICi19835206. VBIPseAer58763_0504.

Organism-specific databases

PseudoCAPiPA0477.

Phylogenomic databases

eggNOGiENOG41064T2. Bacteria.
ENOG4110BBF. LUCA.
HOGENOMiHOG000103695.
InParanoidiQ9I641.
OMAiCPSVYAT.
OrthoDBiEOG6SR906.
PhylomeDBiQ9I641.

Miscellaneous databases

EvolutionaryTraceiQ9I641.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50931. HTH_LYSR. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228Imported.
  2. "The crystal structure of putative transcriptional regulator Pa0477 from Pseudomonas aeruginosa."
    Lunin V.V., Chang C., Skarina T., Gorodischenskaya E., Joachimiak A., Edwards A., Savchenko A.
    Submitted (OCT-2005) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS).

Entry informationi

Entry nameiQ9I641_PSEAE
AccessioniPrimary (citable) accession number: Q9I641
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: March 16, 2016
This is version 102 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.