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Protein
Submitted name:

Probable transcriptional regulator

Gene

PA0784

Organism
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Probable transcriptional regulatorImported
Gene namesi
Ordered Locus Names:PA0784Imported
OrganismiPseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)Imported
Taxonomic identifieri208964 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000002438 Componenti: Chromosome

Organism-specific databases

PseudoCAPiPA0784.

Interactioni

Protein-protein interaction databases

STRINGi208964.PA0784.

Structurei

3D structure databases

ProteinModelPortaliQ9I5F4.
SMRiQ9I5F4. Positions 14-187.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 HTH lysR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

OMAiWCAQAGE.
OrthoDBiEOG6G4VSC.
PhylomeDBiQ9I5F4.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
[Graphical view]
PRINTSiPR00039. HTHLYSR.
PROSITEiPS50931. HTH_LYSR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9I5F4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEIPMFASLP LTALRTFESA ARQSSFKAAA EELAVTPTAV SHQIRSLEAW
60 70 80 90 100
LGVPLFQRLP RKARLTDCGE RLFRSLHGAL LEISQSVDTL RPQRSVGNLT
110 120 130 140 150
VSTTPAFAAL WLVPRLGRFY AAHPQINLRL DTNCEVLDLH QDASIDLVIR
160 170 180 190 200
YSLDDHPNFY GLCLFDECFA VYGSPAQVAL AAERQPTLIS VRWHNSRLYA
210 220 230 240 250
HGWEAWCAQA GEDWMEGQPV IRQYDEEHYA LQAAIAGQGL VLASSILVSE
260 270 280 290 300
SVASGLLRPY RADISVDGAG YSALCVPGRE RHPPVKAFFE WLRLEARQSG

HACRLERDA
Length:309
Mass (Da):34,382
Last modified:March 1, 2001 - v1
Checksum:i5E728E1AF68DAF0A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004091 Genomic DNA. Translation: AAG04173.1.
PIRiG83547.
RefSeqiNP_249475.1. NC_002516.2.
WP_010895522.1. NC_002516.2.

Genome annotation databases

EnsemblBacteriaiAAG04173; AAG04173; PA0784.
GeneIDi880845.
KEGGipae:PA0784.
PATRICi19835844. VBIPseAer58763_0815.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004091 Genomic DNA. Translation: AAG04173.1.
PIRiG83547.
RefSeqiNP_249475.1. NC_002516.2.
WP_010895522.1. NC_002516.2.

3D structure databases

ProteinModelPortaliQ9I5F4.
SMRiQ9I5F4. Positions 14-187.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi208964.PA0784.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAG04173; AAG04173; PA0784.
GeneIDi880845.
KEGGipae:PA0784.
PATRICi19835844. VBIPseAer58763_0815.

Organism-specific databases

PseudoCAPiPA0784.

Phylogenomic databases

OMAiWCAQAGE.
OrthoDBiEOG6G4VSC.
PhylomeDBiQ9I5F4.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
[Graphical view]
PRINTSiPR00039. HTHLYSR.
PROSITEiPS50931. HTH_LYSR. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228Imported.

Entry informationi

Entry nameiQ9I5F4_PSEAE
AccessioniPrimary (citable) accession number: Q9I5F4
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: June 24, 2015
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.