Q9I5F4 (Q9I5F4_PSEAE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Probable transcriptional regulator EMBL AAG04173.1

Gene names

Ordered Locus Names:

PA0784

Organism

Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) [Reference proteome] [HAMAP] EMBL AAG04173.1

Taxonomic identifier

208964 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas aeruginosa group › Pseudomonas aeruginosa

Protein attributes

Sequence length	309 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH lysR-type DNA-binding domain. RuleBase RU000709 SAAS SAAS005119

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000709 SAAS SAAS005119
Ligand	DNA-binding RuleBase RU000709 SAAS SAAS005119
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9I5F4 [UniParc]. Last modified March 1, 2001. Version 1. Checksum: 5E728E1AF68DAF0A	FASTA	309	34,382
	10 20 30 40 50 60 MEIPMFASLP LTALRTFESA ARQSSFKAAA EELAVTPTAV SHQIRSLEAW LGVPLFQRLP 70 80 90 100 110 120 RKARLTDCGE RLFRSLHGAL LEISQSVDTL RPQRSVGNLT VSTTPAFAAL WLVPRLGRFY 130 140 150 160 170 180 AAHPQINLRL DTNCEVLDLH QDASIDLVIR YSLDDHPNFY GLCLFDECFA VYGSPAQVAL 190 200 210 220 230 240 AAERQPTLIS VRWHNSRLYA HGWEAWCAQA GEDWMEGQPV IRQYDEEHYA LQAAIAGQGL 250 260 270 280 290 300 VLASSILVSE SVASGLLRPY RADISVDGAG YSALCVPGRE RHPPVKAFFE WLRLEARQSG HACRLERDA

References

[1]

"Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen." Stover C.K., Pham X.-Q.T., Erwin A.L., Mizoguchi S.D., Warrener P., Hickey M.J., Brinkman F.S.L., Hufnagle W.O., Kowalik D.J., Lagrou M., Garber R.L., Goltry L., Tolentino E., Westbrock-Wadman S., Yuan Y., Brody L.L., Coulter S.N., Folger K.R. , Kas A., Larbig K., Lim R.M., Smith K.A., Spencer D.H., Wong G.K.-S., Wu Z., Paulsen I.T., Reizer J., Saier M.H. Jr., Hancock R.E.W., Lory S., Olson M.V. Nature 406:959-964(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE004091 Genomic DNA. Translation: AAG04173.1.
PIR	G83547.
RefSeq	NP_249475.1. NC_002516.2.
3D structure databases
ProteinModelPortal	Q9I5F4.
SMR	Q9I5F4. Positions 14-187.
ModBase	Search...
Protein-protein interaction databases
STRING	208964.PA0784.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	880845.
KEGG	pae:PA0784.
PATRIC	19835844. VBIPseAer58763_0815.
Organism-specific databases
PseudoCAP	PA0784.
Phylogenomic databases
OMA	WEAWCAQ.
ProtClustDB	CLSK866113.
Family and domain databases
Gene3D	1.10.10.10. 1 hit.
InterPro	IPR005119. LysR_subst-bd. IPR000847. Tscrpt_reg_HTH_LysR. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF00126. HTH_1. 1 hit. PF03466. LysR_substrate. 1 hit. [Graphical view]
PRINTS	PR00039. HTHLYSR.
PROSITE	PS50931. HTH_LYSR. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9I5F4_PSEAE

Accession

Primary (citable) accession number: Q9I5F4

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2001
Last sequence update:	March 1, 2001
Last modified:	May 1, 2013
This is version 73 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)