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Protein
Submitted name:

Uncharacterized protein

Gene

PA1167

Organism
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Protein family/group databases

CAZyiPL7. Polysaccharide Lyase Family 7.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:PA1167Imported
OrganismiPseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)Imported
Taxonomic identifieri208964 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002438 Componenti: Chromosome

Organism-specific databases

PseudoCAPiPA1167.

PTM / Processingi

Proteomic databases

PaxDbiQ9I4H0.

Interactioni

Protein-protein interaction databases

STRINGi208964.PA1167.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1VAVX-ray2.00A/B2-223[»]
ProteinModelPortaliQ9I4H0.
SMRiQ9I4H0. Positions 2-223.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9I4H0.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini3 – 222220Alginate_lyase2InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4106SBQ. Bacteria.
ENOG410YIGY. LUCA.
HOGENOMiHOG000217677.
InParanoidiQ9I4H0.
OMAiMIDLATW.
OrthoDBiEOG61P6PM.
PhylomeDBiQ9I4H0.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
InterProiIPR014895. Alginate_lyase_2.
IPR013320. ConA-like_dom.
[Graphical view]
PfamiPF08787. Alginate_lyase2. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9I4H0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPDLSTWNLT IPQGRPAITI STSQLQRDYR SDYFQRTADG IRFWVPVNGS
60 70 80 90 100
HTRNSEFPRS ELRETLSSGR PYNWRYARAD NWLEATLRIE AVPSTRRMII
110 120 130 140 150
GQIHSDGSNS GQAAPLVKLL YQLRLDQGRV QALVRERPDD GGTRAYTLMD
160 170 180 190 200
GIPLGQPFSY RIGVSRSGLL SVSVNGSALE QQLDPQWAYQ GLYFKAGLYL
210 220
QDNRGPSSEG GRATFSELRV SHQ
Length:223
Mass (Da):25,120
Last modified:March 1, 2001 - v1
Checksum:i75361A3C9B53D568
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004091 Genomic DNA. Translation: AAG04556.1.
PIRiG83498.
RefSeqiNP_249858.1. NC_002516.2.
WP_003106699.1. NZ_ASJY01000153.1.

Genome annotation databases

EnsemblBacteriaiAAG04556; AAG04556; PA1167.
GeneIDi878215.
KEGGipae:PA1167.
PATRICi19836652. VBIPseAer58763_1212.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004091 Genomic DNA. Translation: AAG04556.1.
PIRiG83498.
RefSeqiNP_249858.1. NC_002516.2.
WP_003106699.1. NZ_ASJY01000153.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1VAVX-ray2.00A/B2-223[»]
ProteinModelPortaliQ9I4H0.
SMRiQ9I4H0. Positions 2-223.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi208964.PA1167.

Protein family/group databases

CAZyiPL7. Polysaccharide Lyase Family 7.

Proteomic databases

PaxDbiQ9I4H0.

Protocols and materials databases

DNASUi878215.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAG04556; AAG04556; PA1167.
GeneIDi878215.
KEGGipae:PA1167.
PATRICi19836652. VBIPseAer58763_1212.

Organism-specific databases

PseudoCAPiPA1167.

Phylogenomic databases

eggNOGiENOG4106SBQ. Bacteria.
ENOG410YIGY. LUCA.
HOGENOMiHOG000217677.
InParanoidiQ9I4H0.
OMAiMIDLATW.
OrthoDBiEOG61P6PM.
PhylomeDBiQ9I4H0.

Miscellaneous databases

EvolutionaryTraceiQ9I4H0.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
InterProiIPR014895. Alginate_lyase_2.
IPR013320. ConA-like_dom.
[Graphical view]
PfamiPF08787. Alginate_lyase2. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228Imported.
  2. "Structure and function of a hypothetical Pseudomonas aeruginosa protein PA1167 classified into family PL-7: a novel alginate lyase with a beta-sandwich fold."
    Yamasaki M., Moriwaki S., Miyake O., Hashimoto W., Murata K., Mikami B.
    J. Biol. Chem. 279:31863-31872(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) OF 2-223.

Entry informationi

Entry nameiQ9I4H0_PSEAE
AccessioniPrimary (citable) accession number: Q9I4H0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: March 16, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.