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Q9I469

- COBD_PSEAE

UniProt

Q9I469 - COBD_PSEAE

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Protein

Cobalamin biosynthesis protein CobD

Gene

cobD

Organism
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.By similarity

Pathwayi

GO - Molecular functioni

  1. cobalamin-transporting ATPase activity Source: UniProtKB-HAMAP
  2. threonine-phosphate decarboxylase activity Source: InterPro

GO - Biological processi

  1. cobalamin biosynthetic process Source: UniProtKB-UniPathway
  2. porphyrin-containing compound biosynthetic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Cobalamin biosynthesis, Porphyrin biosynthesis

Enzyme and pathway databases

UniPathwayiUPA00148.

Names & Taxonomyi

Protein namesi
Recommended name:
Cobalamin biosynthesis protein CobD
Gene namesi
Name:cobD
Ordered Locus Names:PA1275
OrganismiPseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Taxonomic identifieri208964 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000002438: Chromosome

Organism-specific databases

PseudoCAPiPA1275.

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 312312Cobalamin biosynthesis protein CobDPRO_0000287753Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi208964.PA1275.

Structurei

Transmembrane

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei59 – 7921HelicalSequence AnalysisAdd
BLAST
Transmembranei81 – 10121HelicalSequence AnalysisAdd
BLAST
Transmembranei153 – 17321HelicalSequence AnalysisAdd
BLAST
Transmembranei241 – 26121HelicalSequence AnalysisAdd
BLAST
Transmembranei292 – 31221HelicalSequence AnalysisAdd
BLAST

Family & Domainsi

Sequence similaritiesi

Belongs to the CobD/CbiB family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG1270.
HOGENOMiHOG000290070.
InParanoidiQ9I469.
KOiK02227.
OMAiHRSPRYA.
OrthoDBiEOG6VXFC9.
PhylomeDBiQ9I469.

Family and domain databases

HAMAPiMF_00024. CobD_CbiB.
InterProiIPR004485. Cobalamin_biosynth_CobD/CbiB.
[Graphical view]
PfamiPF03186. CobD_Cbib. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00380. cobD. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9I469-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSALLGILGV VLDARFGEPQ GWHPLVAFGR LADRLERRFN RSRLAGEADP
60 70 80 90 100
GVGWRSHGVT AWVLAVLPLT LLAWALAELP YLGWLVQALA LYAALGLRSL
110 120 130 140 150
GEHAEPVALA LRAGDLDEAR RRVGYLVSRD TRELDQAGVA RAATESVLEN
160 170 180 190 200
GSDAVYAALF WFAVAGAPGV VLYRLSNTLD AMWGYRNARF ERFGWAAAKI
210 220 230 240 250
DDILNYLPAR LVALTYALLG DTRQALRCWR EQAPQWDSPN AGPVMAAGAG
260 270 280 290 300
ALGVFLGGAA IYHGELHQRP LLGSGPQPQG RDIYRALALV RQGVLLWLLV
310
LAGLWAMGWL HA
Length:312
Mass (Da):33,873
Last modified:March 1, 2001 - v1
Checksum:iC74A880A7F474347
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE004091 Genomic DNA. Translation: AAG04664.1.
PIRiA83486.
RefSeqiNP_249966.1. NC_002516.2.

Genome annotation databases

EnsemblBacteriaiAAG04664; AAG04664; PA1275.
GeneIDi881384.
KEGGipae:PA1275.
PATRICi19836878. VBIPseAer58763_1325.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE004091 Genomic DNA. Translation: AAG04664.1 .
PIRi A83486.
RefSeqi NP_249966.1. NC_002516.2.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 208964.PA1275.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAG04664 ; AAG04664 ; PA1275 .
GeneIDi 881384.
KEGGi pae:PA1275.
PATRICi 19836878. VBIPseAer58763_1325.

Organism-specific databases

PseudoCAPi PA1275.

Phylogenomic databases

eggNOGi COG1270.
HOGENOMi HOG000290070.
InParanoidi Q9I469.
KOi K02227.
OMAi HRSPRYA.
OrthoDBi EOG6VXFC9.
PhylomeDBi Q9I469.

Enzyme and pathway databases

UniPathwayi UPA00148 .

Family and domain databases

HAMAPi MF_00024. CobD_CbiB.
InterProi IPR004485. Cobalamin_biosynth_CobD/CbiB.
[Graphical view ]
Pfami PF03186. CobD_Cbib. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR00380. cobD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228.

Entry informationi

Entry nameiCOBD_PSEAE
AccessioniPrimary (citable) accession number: Q9I469
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 15, 2007
Last sequence update: March 1, 2001
Last modified: October 29, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3