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Q9I469 (COBD_PSEAE) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 73. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Cobalamin biosynthesis protein CobD
Gene names
Name:cobD
Ordered Locus Names:PA1275
OrganismPseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) [Reference proteome] [HAMAP]
Taxonomic identifier208964 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length312 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group By similarity. HAMAP-Rule MF_00024

Pathway

Cofactor biosynthesis; adenosylcobalamin biosynthesis. HAMAP-Rule MF_00024

Subcellular location

Cell membrane; Multi-pass membrane protein Potential HAMAP-Rule MF_00024.

Sequence similarities

Belongs to the CobD/CbiB family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 312312Cobalamin biosynthesis protein CobD HAMAP-Rule MF_00024
PRO_0000287753

Regions

Transmembrane59 – 7921Helical; Potential
Transmembrane81 – 10121Helical; Potential
Transmembrane153 – 17321Helical; Potential
Transmembrane241 – 26121Helical; Potential
Transmembrane292 – 31221Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
Q9I469 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: C74A880A7F474347

FASTA31233,873
        10         20         30         40         50         60 
MSALLGILGV VLDARFGEPQ GWHPLVAFGR LADRLERRFN RSRLAGEADP GVGWRSHGVT 

        70         80         90        100        110        120 
AWVLAVLPLT LLAWALAELP YLGWLVQALA LYAALGLRSL GEHAEPVALA LRAGDLDEAR 

       130        140        150        160        170        180 
RRVGYLVSRD TRELDQAGVA RAATESVLEN GSDAVYAALF WFAVAGAPGV VLYRLSNTLD 

       190        200        210        220        230        240 
AMWGYRNARF ERFGWAAAKI DDILNYLPAR LVALTYALLG DTRQALRCWR EQAPQWDSPN 

       250        260        270        280        290        300 
AGPVMAAGAG ALGVFLGGAA IYHGELHQRP LLGSGPQPQG RDIYRALALV RQGVLLWLLV 

       310 
LAGLWAMGWL HA 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE004091 Genomic DNA. Translation: AAG04664.1.
PIRA83486.
RefSeqNP_249966.1. NC_002516.2.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING208964.PA1275.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAG04664; AAG04664; PA1275.
GeneID881384.
KEGGpae:PA1275.
PATRIC19836878. VBIPseAer58763_1325.

Organism-specific databases

PseudoCAPPA1275.

Phylogenomic databases

eggNOGCOG1270.
HOGENOMHOG000290070.
KOK02227.
OMAHRSPRYA.
OrthoDBEOG6VXFC9.
PhylomeDBQ9I469.

Enzyme and pathway databases

UniPathwayUPA00148.

Family and domain databases

HAMAPMF_00024. CobD_CbiB.
InterProIPR004485. Cobalamin_biosynth_CobD/CbiB.
[Graphical view]
PfamPF03186. CobD_Cbib. 1 hit.
[Graphical view]
TIGRFAMsTIGR00380. cobD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameCOBD_PSEAE
AccessionPrimary (citable) accession number: Q9I469
Entry history
Integrated into UniProtKB/Swiss-Prot: May 15, 2007
Last sequence update: March 1, 2001
Last modified: July 9, 2014
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways