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Protein
Submitted name:

Probable transcriptional regulator

Gene

PA1663

Organism
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation, Two-component regulatory systemSAAS annotation

Keywords - Ligandi

ATP-bindingUniRule annotationSAAS annotation, DNA-bindingUniRule annotationSAAS annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Probable transcriptional regulatorImported
Gene namesi
Ordered Locus Names:PA1663Imported
OrganismiPseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)Imported
Taxonomic identifieri208964 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002438 Componenti: Chromosome

Organism-specific databases

PseudoCAPiPA1663.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ9I362.

Interactioni

Protein-protein interaction databases

STRINGi208964.PA1663.

Structurei

3D structure databases

ProteinModelPortaliQ9I362.
SMRiQ9I362. Positions 195-493.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini195 – 424230Sigma-54 factor interactionInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 sigma-54 factor interaction domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108JUA. Bacteria.
COG3604. LUCA.
HOGENOMiHOG000058487.
InParanoidiQ9I362.
KOiK11914.
OMAiFALCQNR.
OrthoDBiEOG6WHNMG.
PhylomeDBiQ9I362.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
3.30.450.40. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR029016. GAF_dom-like.
IPR009057. Homeodomain-like.
IPR002197. HTH_Fis.
IPR027417. P-loop_NTPase.
IPR002078. Sigma_54_int.
IPR025662. Sigma_54_int_dom_ATP-bd_1.
IPR025943. Sigma_54_int_dom_ATP-bd_2.
[Graphical view]
PfamiPF02954. HTH_8. 1 hit.
PF00158. Sigma54_activat. 1 hit.
[Graphical view]
PRINTSiPR01590. HTHFIS.
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF52540. SSF52540. 1 hit.
SSF55781. SSF55781. 1 hit.
PROSITEiPS00675. SIGMA54_INTERACT_1. 1 hit.
PS00676. SIGMA54_INTERACT_2. 1 hit.
PS50045. SIGMA54_INTERACT_4. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9I362-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFSRVPQPLA FAEALLAQFG ALSRETDITA LLGGFARAVG ELSGCELSQL
60 70 80 90 100
YLLDQTHTAL TLNAECRDGL LQALEPSSLP ADYTGEQLLQ FALCQNRVVS
110 120 130 140 150
LVDLPSRLHE TGFLPAGEQP WLSLLCVPLV SPEKTVEGMV VCATRRPLDL
160 170 180 190 200
QGFAHPLGQL GSFVLAQLHL LQRLSQPSGE PQGPSSAPVV SGYGLIGRSA
210 220 230 240 250
AMRETCRLIS KVLHNPYTVL LQGETGTGKE VVARAIHEYG PRRAQAFVVQ
260 270 280 290 300
NCAAFPENLL ESELFGYRKG AFTGAERDRP GLFDAADGGT LLLDEIGDMP
310 320 330 340 350
LSLQAKLLRV LQEGEIRPLG GNDTHKVDVR IIAATHRDLA LLVRDGKFRE
360 370 380 390 400
DLYYRLAQFP IELPPLRQRE GDALELARHF AERACVFLRR APLGWSAEAL
410 420 430 440 450
ELLDGYGFPG NVRELKGLVE CAVLLCEGEM LLAEHFSLRA PPEAEAPLKL
460 470 480 490 500
REHLEQIERD LLLACLRRNA GNQTLAAREL GLPRRTLIYR MGRLNIHFGD

PRT
Length:503
Mass (Da):55,291
Last modified:March 1, 2001 - v1
Checksum:i28FA3F41683A3C2A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004091 Genomic DNA. Translation: AAG05052.1.
PIRiB83437.
RefSeqiNP_250354.1. NC_002516.2.
WP_003114610.1. NZ_ASJY01000242.1.

Genome annotation databases

EnsemblBacteriaiAAG05052; AAG05052; PA1663.
GeneIDi880608.
KEGGipae:PA1663.
PATRICi19837677. VBIPseAer58763_1724.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004091 Genomic DNA. Translation: AAG05052.1.
PIRiB83437.
RefSeqiNP_250354.1. NC_002516.2.
WP_003114610.1. NZ_ASJY01000242.1.

3D structure databases

ProteinModelPortaliQ9I362.
SMRiQ9I362. Positions 195-493.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi208964.PA1663.

Proteomic databases

PaxDbiQ9I362.

Protocols and materials databases

DNASUi880608.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAG05052; AAG05052; PA1663.
GeneIDi880608.
KEGGipae:PA1663.
PATRICi19837677. VBIPseAer58763_1724.

Organism-specific databases

PseudoCAPiPA1663.

Phylogenomic databases

eggNOGiENOG4108JUA. Bacteria.
COG3604. LUCA.
HOGENOMiHOG000058487.
InParanoidiQ9I362.
KOiK11914.
OMAiFALCQNR.
OrthoDBiEOG6WHNMG.
PhylomeDBiQ9I362.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
3.30.450.40. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR029016. GAF_dom-like.
IPR009057. Homeodomain-like.
IPR002197. HTH_Fis.
IPR027417. P-loop_NTPase.
IPR002078. Sigma_54_int.
IPR025662. Sigma_54_int_dom_ATP-bd_1.
IPR025943. Sigma_54_int_dom_ATP-bd_2.
[Graphical view]
PfamiPF02954. HTH_8. 1 hit.
PF00158. Sigma54_activat. 1 hit.
[Graphical view]
PRINTSiPR01590. HTHFIS.
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF52540. SSF52540. 1 hit.
SSF55781. SSF55781. 1 hit.
PROSITEiPS00675. SIGMA54_INTERACT_1. 1 hit.
PS00676. SIGMA54_INTERACT_2. 1 hit.
PS50045. SIGMA54_INTERACT_4. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228Imported.

Entry informationi

Entry nameiQ9I362_PSEAE
AccessioniPrimary (citable) accession number: Q9I362
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: June 8, 2016
This is version 108 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.